Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC129778.1-202ENST00000623812 261 ntBASIC5.4□□□□□ -1.54
CDH13P55290 AL390318.1-201ENST00000624564 687 ntBASIC5.4□□□□□ -1.54
CDH13P55290 AL591379.1-207ENST00000635982 261 ntBASIC5.4□□□□□ -1.54
CDH13P55290 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.4□□□□□ -1.54
CDH13P55290 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.4□□□□□ -1.54
CDH13P55290 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
CDH13P55290 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.4□□□□□ -1.54
CDH13P55290 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH13P55290 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.4□□□□□ -1.55
CDH13P55290 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH13P55290 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.4□□□□□ -1.55
CDH13P55290 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDH13P55290 MAPK10-338ENST00000641647 3362 ntBASIC5.4□□□□□ -1.55
CDH13P55290 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CDH13P55290 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH13P55290 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH13P55290 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.4□□□□□ -1.55
CDH13P55290 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.4□□□□□ -1.55
CDH13P55290 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.4□□□□□ -1.55
CDH13P55290 AC083843.2-201ENST00000568248 6253 ntBASIC5.39□□□□□ -1.55
CDH13P55290 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH13P55290 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH13P55290 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH13P55290 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH13P55290 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH13P55290 AC006484.1-201ENST00000435086 1884 ntBASIC5.39□□□□□ -1.55
CDH13P55290 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH13P55290 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH13P55290 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH13P55290 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH13P55290 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH13P55290 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH13P55290 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH13P55290 CCNB2P1-201ENST00000399411 1150 ntBASIC5.39□□□□□ -1.55
CDH13P55290 OR7E101P-201ENST00000400428 513 ntBASIC5.39□□□□□ -1.55
CDH13P55290 PPIAP9-201ENST00000403866 498 ntBASIC5.39□□□□□ -1.55
CDH13P55290 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH13P55290 AC007563.3-201ENST00000433233 371 ntBASIC5.39□□□□□ -1.55
CDH13P55290 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH13P55290 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH13P55290 Z84478.1-201ENST00000438230 1219 ntBASIC5.39□□□□□ -1.55
CDH13P55290 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH13P55290 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH13P55290 AP002345.1-201ENST00000456493 928 ntBASIC5.39□□□□□ -1.55
CDH13P55290 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.39□□□□□ -1.55
CDH13P55290 RPSAP39-201ENST00000467439 883 ntBASIC5.39□□□□□ -1.55
CDH13P55290 RPS3AP15-201ENST00000483874 781 ntBASIC5.39□□□□□ -1.55
CDH13P55290 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH13P55290 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.39□□□□□ -1.55
CDH13P55290 FABP5P6-201ENST00000510588 409 ntBASIC5.39□□□□□ -1.55
CDH13P55290 HMGB1P47-201ENST00000511281 589 ntBASIC5.39□□□□□ -1.55
CDH13P55290 OR8K2P-201ENST00000524645 927 ntBASIC5.39□□□□□ -1.55
CDH13P55290 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH13P55290 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH13P55290 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH13P55290 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH13P55290 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH13P55290 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH13P55290 H3F3BP2-201ENST00000583907 357 ntBASIC5.39□□□□□ -1.55
CDH13P55290 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.39□□□□□ -1.55
CDH13P55290 AC010503.3-201ENST00000594355 540 ntBASIC5.39□□□□□ -1.55
CDH13P55290 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH13P55290 AL133247.2-201ENST00000603236 482 ntBASIC5.39□□□□□ -1.55
CDH13P55290 AP004372.1-201ENST00000604842 844 ntBASIC5.39□□□□□ -1.55
CDH13P55290 AC025574.2-201ENST00000615621 514 ntBASIC5.39□□□□□ -1.55
CDH13P55290 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.39□□□□□ -1.55
CDH13P55290 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH13P55290 FO681491.1-202ENST00000623392 737 ntBASIC5.39□□□□□ -1.55
CDH13P55290 AP003499.2-201ENST00000624100 483 ntBASIC5.39□□□□□ -1.55
CDH13P55290 AC019080.5-201ENST00000624891 757 ntBASIC5.39□□□□□ -1.55
CDH13P55290 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH13P55290 AC087565.3-203ENST00000641018 837 ntBASIC5.39□□□□□ -1.55
CDH13P55290 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH13P55290 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CDH13P55290 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
CDH13P55290 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CDH13P55290 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH13P55290 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH13P55290 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CDH13P55290 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
CDH13P55290 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.38□□□□□ -1.55
CDH13P55290 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
CDH13P55290 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDH13P55290 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH13P55290 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.38□□□□□ -1.55
CDH13P55290 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.38□□□□□ -1.55
CDH13P55290 RPS10P18-201ENST00000442662 495 ntBASIC5.38□□□□□ -1.55
CDH13P55290 AP000547.1-201ENST00000454360 617 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms