Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RPSAP51-201ENST00000497462 645 ntBASIC5.3□□□□□ -1.56
CDH12P55289 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH12P55289 RBBP4P1-201ENST00000502424 1276 ntBASIC5.3□□□□□ -1.56
CDH12P55289 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.3□□□□□ -1.56
CDH12P55289 HSD3BP3-201ENST00000514706 994 ntBASIC5.3□□□□□ -1.56
CDH12P55289 RNU5A-7P-201ENST00000515979 116 ntBASIC5.3□□□□□ -1.56
CDH12P55289 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH12P55289 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.3□□□□□ -1.56
CDH12P55289 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH12P55289 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.3□□□□□ -1.56
CDH12P55289 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH12P55289 RPA2P1-201ENST00000556557 721 ntBASIC5.3□□□□□ -1.56
CDH12P55289 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH12P55289 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH12P55289 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH12P55289 MIR3154-201ENST00000577829 84 ntBASIC5.3□□□□□ -1.56
CDH12P55289 OOSP1P2-201ENST00000579644 351 ntBASIC5.3□□□□□ -1.56
CDH12P55289 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH12P55289 AC006116.5-201ENST00000591936 559 ntBASIC5.3□□□□□ -1.56
CDH12P55289 AF230666.2-201ENST00000602328 725 ntBASIC5.3□□□□□ -1.56
CDH12P55289 AP004372.1-201ENST00000604842 844 ntBASIC5.3□□□□□ -1.56
CDH12P55289 AL121652.1-201ENST00000608851 448 ntBASIC5.3□□□□□ -1.56
CDH12P55289 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH12P55289 AC245014.3-201ENST00000618589 347 ntBASIC5.3□□□□□ -1.56
CDH12P55289 AC007275.1-201ENST00000621243 671 ntBASIC5.3□□□□□ -1.56
CDH12P55289 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CDH12P55289 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH12P55289 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CDH12P55289 AP001029.2-203ENST00000589795 4910 ntBASIC5.3□□□□□ -1.56
CDH12P55289 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH12P55289 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH12P55289 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH12P55289 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH12P55289 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CDH12P55289 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH12P55289 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH12P55289 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH12P55289 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH12P55289 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CDH12P55289 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CDH12P55289 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH12P55289 AL161912.4-201ENST00000623889 2468 ntBASIC5.3□□□□□ -1.56
CDH12P55289 AC093909.5-201ENST00000621839 1799 ntBASIC5.29□□□□□ -1.56
CDH12P55289 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH12P55289 AC090181.3-201ENST00000624777 1514 ntBASIC5.29□□□□□ -1.56
CDH12P55289 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CDH12P55289 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH12P55289 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH12P55289 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH12P55289 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH12P55289 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH12P55289 AC104966.1-201ENST00000467010 1464 ntBASIC5.29□□□□□ -1.56
CDH12P55289 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH12P55289 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH12P55289 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.29□□□□□ -1.56
CDH12P55289 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH12P55289 MIR16-2-201ENST00000362117 81 ntBASIC5.29□□□□□ -1.56
CDH12P55289 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CDH12P55289 SNORA5.1-201ENST00000384275 131 ntBASIC5.29□□□□□ -1.56
CDH12P55289 SNORD65-201ENST00000391079 73 ntBASIC5.29□□□□□ -1.56
CDH12P55289 AC096921.1-201ENST00000411661 375 ntBASIC5.29□□□□□ -1.56
CDH12P55289 AL354890.1-201ENST00000413730 346 ntBASIC5.29□□□□□ -1.56
CDH12P55289 AL133482.1-201ENST00000415988 498 ntBASIC5.29□□□□□ -1.56
CDH12P55289 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH12P55289 AC013262.1-201ENST00000426710 252 ntBASIC5.29□□□□□ -1.56
CDH12P55289 VTI1BP4-201ENST00000427516 527 ntBASIC5.29□□□□□ -1.56
CDH12P55289 AC114973.1-201ENST00000429057 632 ntBASIC5.29□□□□□ -1.56
CDH12P55289 MTATP6P17-201ENST00000431030 672 ntBASIC5.29□□□□□ -1.56
CDH12P55289 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH12P55289 TUBB4BP6-201ENST00000437576 479 ntBASIC5.29□□□□□ -1.56
CDH12P55289 AL359265.1-201ENST00000440296 795 ntBASIC5.29□□□□□ -1.56
CDH12P55289 ATP5LP2-201ENST00000440646 311 ntBASIC5.29□□□□□ -1.56
CDH12P55289 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH12P55289 EEF1B2P3-201ENST00000447718 678 ntBASIC5.29□□□□□ -1.56
CDH12P55289 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH12P55289 AC009963.3-201ENST00000458090 486 ntBASIC5.29□□□□□ -1.56
CDH12P55289 AC099521.1-201ENST00000482557 334 ntBASIC5.29□□□□□ -1.56
CDH12P55289 AC008410.1-201ENST00000483777 339 ntBASIC5.29□□□□□ -1.56
CDH12P55289 DUTP1-201ENST00000493631 470 ntBASIC5.29□□□□□ -1.56
CDH12P55289 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH12P55289 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH12P55289 SETP21-201ENST00000514799 892 ntBASIC5.29□□□□□ -1.56
CDH12P55289 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH12P55289 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH12P55289 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH12P55289 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH12P55289 AC139697.1-201ENST00000548429 745 ntBASIC5.29□□□□□ -1.56
CDH12P55289 AC090666.1-201ENST00000578241 445 ntBASIC5.29□□□□□ -1.56
CDH12P55289 MIR4776-2-201ENST00000580204 80 ntBASIC5.29□□□□□ -1.56
CDH12P55289 MIR4433B-201ENST00000581329 102 ntBASIC5.29□□□□□ -1.56
CDH12P55289 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.29□□□□□ -1.56
CDH12P55289 AC090236.2-201ENST00000587933 1101 ntBASIC5.29□□□□□ -1.56
CDH12P55289 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH12P55289 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH12P55289 AC108673.3-201ENST00000609183 335 ntBASIC5.29□□□□□ -1.56
CDH12P55289 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CDH12P55289 AP000770.2-201ENST00000623694 100 ntBASIC5.29□□□□□ -1.56
CDH12P55289 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH12P55289 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH12P55289 CASC19-274ENST00000642018 970 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms