Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.48□□□□□ -1.53
LIMK2P53671 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.48□□□□□ -1.53
LIMK2P53671 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.48□□□□□ -1.53
LIMK2P53671 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.48□□□□□ -1.53
LIMK2P53671 AC010245.2-201ENST00000606908 1167 ntBASIC5.48□□□□□ -1.53
LIMK2P53671 AC096586.2-201ENST00000610260 441 ntBASIC5.48□□□□□ -1.53
LIMK2P53671 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.48□□□□□ -1.53
LIMK2P53671 MIR8080-201ENST00000622224 89 ntBASIC5.48□□□□□ -1.53
LIMK2P53671 MIR6719-201ENST00000622428 87 ntBASIC5.48□□□□□ -1.53
LIMK2P53671 AC004808.2-201ENST00000627965 773 ntBASIC5.48□□□□□ -1.53
LIMK2P53671 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.48□□□□□ -1.53
LIMK2P53671 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
LIMK2P53671 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
LIMK2P53671 AL360270.2-201ENST00000562952 5985 ntBASIC5.48□□□□□ -1.53
LIMK2P53671 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LIMK2P53671 AC003973.3-201ENST00000624863 2822 ntBASIC5.48□□□□□ -1.53
LIMK2P53671 NAMPTP1-201ENST00000440465 2514 ntBASIC5.48□□□□□ -1.53
LIMK2P53671 AC116158.1-201ENST00000560231 2129 ntBASIC5.48□□□□□ -1.53
LIMK2P53671 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.48□□□□□ -1.53
LIMK2P53671 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIMK2P53671 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LIMK2P53671 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.48□□□□□ -1.53
LIMK2P53671 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
LIMK2P53671 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK2P53671 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK2P53671 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK2P53671 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK2P53671 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
LIMK2P53671 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK2P53671 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK2P53671 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK2P53671 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK2P53671 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK2P53671 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.47□□□□□ -1.53
LIMK2P53671 U3.7-201ENST00000363668 216 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.47□□□□□ -1.53
LIMK2P53671 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.47□□□□□ -1.53
LIMK2P53671 MIR1286-201ENST00000408112 78 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 AP000534.2-201ENST00000412729 568 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.47□□□□□ -1.53
LIMK2P53671 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.47□□□□□ -1.53
LIMK2P53671 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.47□□□□□ -1.53
LIMK2P53671 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.47□□□□□ -1.53
LIMK2P53671 AC016772.1-201ENST00000444170 1261 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.47□□□□□ -1.53
LIMK2P53671 AC090804.1-201ENST00000448870 490 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 AL450023.1-201ENST00000450868 751 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 AL606490.1-201ENST00000452266 765 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.47□□□□□ -1.53
LIMK2P53671 COPS8P2-201ENST00000473228 627 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 DEFB109A-201ENST00000482450 265 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 EIF1P7-201ENST00000487533 337 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 IGBP1P4-201ENST00000503202 879 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 AC113398.2-201ENST00000507630 558 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.47□□□□□ -1.53
LIMK2P53671 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.47□□□□□ -1.53
LIMK2P53671 AC130364.2-201ENST00000528639 604 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 OR11H3P-201ENST00000554547 982 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.47□□□□□ -1.53
LIMK2P53671 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.47□□□□□ -1.53
LIMK2P53671 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK2P53671 MRPS21P7-201ENST00000566937 238 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 AC010547.7-201ENST00000570323 333 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 MIR1269B-201ENST00000580405 75 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.47□□□□□ -1.53
LIMK2P53671 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK2P53671 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.47□□□□□ -1.53
LIMK2P53671 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.47□□□□□ -1.53
LIMK2P53671 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.47□□□□□ -1.53
LIMK2P53671 AL359513.1-201ENST00000614364 557 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.47□□□□□ -1.53
LIMK2P53671 AC026367.3-201ENST00000619032 590 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.47□□□□□ -1.53
LIMK2P53671 AC135068.5-201ENST00000624197 983 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.47□□□□□ -1.53
LIMK2P53671 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.47□□□□□ -1.53
LIMK2P53671 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.47□□□□□ -1.53
LIMK2P53671 AC073869.8-201ENST00000641806 335 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.47□□□□□ -1.53
LIMK2P53671 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK2P53671 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
LIMK2P53671 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK2P53671 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK2P53671 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
LIMK2P53671 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.47□□□□□ -1.53
LIMK2P53671 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK2P53671 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.47□□□□□ -1.53
LIMK2P53671 AL078621.3-201ENST00000623707 2042 ntBASIC5.47□□□□□ -1.53
LIMK2P53671 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
LIMK2P53671 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
LIMK2P53671 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.46□□□□□ -1.54
LIMK2P53671 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LIMK2P53671 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.46□□□□□ -1.54
LIMK2P53671 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
LIMK2P53671 AC092376.2-201ENST00000622621 4116 ntBASIC5.46□□□□□ -1.54
LIMK2P53671 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
LIMK2P53671 AC125336.1-201ENST00000508893 2827 ntBASIC5.46□□□□□ -1.54
LIMK2P53671 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
LIMK2P53671 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LIMK2P53671 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms