Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 LINC00556-201ENST00000569603 412 ntBASIC6.12□□□□□ -1.43
COPB1P53618 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
COPB1P53618 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.12□□□□□ -1.43
COPB1P53618 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.12□□□□□ -1.43
COPB1P53618 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.12□□□□□ -1.43
COPB1P53618 AF129408.1-201ENST00000608767 431 ntBASIC6.12□□□□□ -1.43
COPB1P53618 AC027449.1-201ENST00000608890 407 ntBASIC6.12□□□□□ -1.43
COPB1P53618 BNIP3P41-202ENST00000616656 861 ntBASIC6.12□□□□□ -1.43
COPB1P53618 AL163051.2-201ENST00000618976 735 ntBASIC6.12□□□□□ -1.43
COPB1P53618 LINC00216-201ENST00000623548 1126 ntBASIC6.12□□□□□ -1.43
COPB1P53618 AP003485.1-201ENST00000625093 753 ntBASIC6.12□□□□□ -1.43
COPB1P53618 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.12□□□□□ -1.43
COPB1P53618 AC008993.2-201ENST00000631744 806 ntBASIC6.12□□□□□ -1.43
COPB1P53618 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
COPB1P53618 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COPB1P53618 AC144833.1-201ENST00000567953 4089 ntBASIC6.12□□□□□ -1.43
COPB1P53618 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COPB1P53618 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.12□□□□□ -1.43
COPB1P53618 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COPB1P53618 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
COPB1P53618 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
COPB1P53618 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COPB1P53618 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
COPB1P53618 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COPB1P53618 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COPB1P53618 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COPB1P53618 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.11□□□□□ -1.43
COPB1P53618 AMZ2P2-201ENST00000406819 1057 ntBASIC6.11□□□□□ -1.43
COPB1P53618 MTATP6P31-201ENST00000406985 692 ntBASIC6.11□□□□□ -1.43
COPB1P53618 NAP1L4P2-201ENST00000425958 899 ntBASIC6.11□□□□□ -1.43
COPB1P53618 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.11□□□□□ -1.43
COPB1P53618 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.11□□□□□ -1.43
COPB1P53618 MTATP6P17-201ENST00000431030 672 ntBASIC6.11□□□□□ -1.43
COPB1P53618 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.11□□□□□ -1.43
COPB1P53618 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.11□□□□□ -1.43
COPB1P53618 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.11□□□□□ -1.43
COPB1P53618 AL606517.1-201ENST00000446914 387 ntBASIC6.11□□□□□ -1.43
COPB1P53618 REG1CP-206ENST00000447469 496 ntBASIC6.11□□□□□ -1.43
COPB1P53618 PSAT1P4-201ENST00000466500 526 ntBASIC6.11□□□□□ -1.43
COPB1P53618 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.11□□□□□ -1.43
COPB1P53618 LSM3P4-201ENST00000502948 309 ntBASIC6.11□□□□□ -1.43
COPB1P53618 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.11□□□□□ -1.43
COPB1P53618 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.11□□□□□ -1.43
COPB1P53618 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.11□□□□□ -1.43
COPB1P53618 AC113192.3-201ENST00000529152 742 ntBASIC6.11□□□□□ -1.43
COPB1P53618 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.11□□□□□ -1.43
COPB1P53618 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.11□□□□□ -1.43
COPB1P53618 AC104072.1-201ENST00000568817 668 ntBASIC6.11□□□□□ -1.43
COPB1P53618 MIR7853-201ENST00000584820 132 ntBASIC6.11□□□□□ -1.43
COPB1P53618 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.11□□□□□ -1.43
COPB1P53618 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.11□□□□□ -1.43
COPB1P53618 AC125494.2-201ENST00000602431 657 ntBASIC6.11□□□□□ -1.43
COPB1P53618 AC097520.1-201ENST00000624435 385 ntBASIC6.11□□□□□ -1.43
COPB1P53618 OR4G3P-201ENST00000633500 913 ntBASIC6.11□□□□□ -1.43
COPB1P53618 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.11□□□□□ -1.43
COPB1P53618 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COPB1P53618 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
COPB1P53618 AC139426.3-201ENST00000605648 2059 ntBASIC6.11□□□□□ -1.43
COPB1P53618 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COPB1P53618 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COPB1P53618 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.1□□□□□ -1.43
COPB1P53618 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COPB1P53618 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COPB1P53618 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.1□□□□□ -1.43
COPB1P53618 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.1□□□□□ -1.43
COPB1P53618 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COPB1P53618 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COPB1P53618 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COPB1P53618 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.1□□□□□ -1.43
COPB1P53618 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COPB1P53618 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
COPB1P53618 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
COPB1P53618 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COPB1P53618 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.1□□□□□ -1.43
COPB1P53618 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.1□□□□□ -1.43
COPB1P53618 AC023490.2-201ENST00000359859 470 ntBASIC6.1□□□□□ -1.43
COPB1P53618 SNORA64.1-201ENST00000362600 132 ntBASIC6.1□□□□□ -1.43
COPB1P53618 AL009179.1-201ENST00000406085 265 ntBASIC6.1□□□□□ -1.43
COPB1P53618 RN7SKP199-201ENST00000410325 305 ntBASIC6.1□□□□□ -1.43
COPB1P53618 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.1□□□□□ -1.43
COPB1P53618 AK4P4-201ENST00000419465 646 ntBASIC6.1□□□□□ -1.43
COPB1P53618 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.1□□□□□ -1.43
COPB1P53618 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.1□□□□□ -1.43
COPB1P53618 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.1□□□□□ -1.43
COPB1P53618 MTCO2P17-201ENST00000424336 677 ntBASIC6.1□□□□□ -1.43
COPB1P53618 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.1□□□□□ -1.43
COPB1P53618 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.1□□□□□ -1.43
COPB1P53618 PPIAP20-201ENST00000449839 135 ntBASIC6.1□□□□□ -1.43
COPB1P53618 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.1□□□□□ -1.43
COPB1P53618 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COPB1P53618 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.1□□□□□ -1.43
COPB1P53618 OR5H7P-201ENST00000514084 930 ntBASIC6.1□□□□□ -1.43
COPB1P53618 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.1□□□□□ -1.43
COPB1P53618 IGLVIV-64-201ENST00000518581 301 ntBASIC6.1□□□□□ -1.43
COPB1P53618 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.1□□□□□ -1.43
COPB1P53618 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.1□□□□□ -1.43
COPB1P53618 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.1□□□□□ -1.43
COPB1P53618 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
COPB1P53618 AL583832.1-201ENST00000603227 784 ntBASIC6.1□□□□□ -1.43
COPB1P53618 AC067773.1-201ENST00000603284 1094 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms