Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDX1P52945 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
PDX1P52945 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDX1P52945 U8.4-201ENST00000363626 134 ntBASIC5.39□□□□□ -1.55
PDX1P52945 RNA5SP335-201ENST00000363817 110 ntBASIC5.39□□□□□ -1.55
PDX1P52945 RNU4-2-201ENST00000365668 141 ntBASIC5.39□□□□□ -1.55
PDX1P52945 AL139039.2-201ENST00000407436 479 ntBASIC5.39□□□□□ -1.55
PDX1P52945 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDX1P52945 RN7SKP17-201ENST00000411242 351 ntBASIC5.39□□□□□ -1.55
PDX1P52945 AL392003.1-201ENST00000434394 243 ntBASIC5.39□□□□□ -1.55
PDX1P52945 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.39□□□□□ -1.55
PDX1P52945 RPS21P4-201ENST00000487122 248 ntBASIC5.39□□□□□ -1.55
PDX1P52945 AC004453.1-201ENST00000487895 408 ntBASIC5.39□□□□□ -1.55
PDX1P52945 DUTP1-201ENST00000493631 470 ntBASIC5.39□□□□□ -1.55
PDX1P52945 AC090058.1-201ENST00000498788 435 ntBASIC5.39□□□□□ -1.55
PDX1P52945 RPEP1-201ENST00000504507 658 ntBASIC5.39□□□□□ -1.55
PDX1P52945 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.39□□□□□ -1.55
PDX1P52945 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.39□□□□□ -1.55
PDX1P52945 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.39□□□□□ -1.55
PDX1P52945 GTF2IP11-201ENST00000526931 420 ntBASIC5.39□□□□□ -1.55
PDX1P52945 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.39□□□□□ -1.55
PDX1P52945 HMGN2P6-201ENST00000551091 273 ntBASIC5.39□□□□□ -1.55
PDX1P52945 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.39□□□□□ -1.55
PDX1P52945 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.39□□□□□ -1.55
PDX1P52945 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.39□□□□□ -1.55
PDX1P52945 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.39□□□□□ -1.55
PDX1P52945 AC068870.2-201ENST00000620635 389 ntBASIC5.39□□□□□ -1.55
PDX1P52945 AC020923.1-201ENST00000624021 917 ntBASIC5.39□□□□□ -1.55
PDX1P52945 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDX1P52945 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDX1P52945 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PDX1P52945 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PDX1P52945 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
PDX1P52945 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDX1P52945 MSL3P1-202ENST00000440028 1468 ntBASIC5.39□□□□□ -1.55
PDX1P52945 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
PDX1P52945 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDX1P52945 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.38□□□□□ -1.55
PDX1P52945 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.38□□□□□ -1.55
PDX1P52945 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDX1P52945 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PDX1P52945 RNU6-618P-201ENST00000363518 112 ntBASIC5.38□□□□□ -1.55
PDX1P52945 MIR7-1-201ENST00000384871 110 ntBASIC5.38□□□□□ -1.55
PDX1P52945 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.38□□□□□ -1.55
PDX1P52945 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.38□□□□□ -1.55
PDX1P52945 RPL12P3-201ENST00000440080 396 ntBASIC5.38□□□□□ -1.55
PDX1P52945 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.38□□□□□ -1.55
PDX1P52945 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.38□□□□□ -1.55
PDX1P52945 REG1CP-206ENST00000447469 496 ntBASIC5.38□□□□□ -1.55
PDX1P52945 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.38□□□□□ -1.55
PDX1P52945 AL035090.1-201ENST00000454835 332 ntBASIC5.38□□□□□ -1.55
PDX1P52945 AC104849.1-201ENST00000462623 405 ntBASIC5.38□□□□□ -1.55
PDX1P52945 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.38□□□□□ -1.55
PDX1P52945 CBX1P5-201ENST00000475330 559 ntBASIC5.38□□□□□ -1.55
PDX1P52945 PDCL3P4-201ENST00000489621 720 ntBASIC5.38□□□□□ -1.55
PDX1P52945 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
PDX1P52945 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.38□□□□□ -1.55
PDX1P52945 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.38□□□□□ -1.55
PDX1P52945 IGLV3-24-201ENST00000517477 197 ntBASIC5.38□□□□□ -1.55
PDX1P52945 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.38□□□□□ -1.55
PDX1P52945 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
PDX1P52945 AC026688.1-201ENST00000520639 1168 ntBASIC5.38□□□□□ -1.55
PDX1P52945 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.38□□□□□ -1.55
PDX1P52945 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.38□□□□□ -1.55
PDX1P52945 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PDX1P52945 AC005000.1-201ENST00000536192 288 ntBASIC5.38□□□□□ -1.55
PDX1P52945 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.38□□□□□ -1.55
PDX1P52945 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.38□□□□□ -1.55
PDX1P52945 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.38□□□□□ -1.55
PDX1P52945 AL731537.2-201ENST00000561565 951 ntBASIC5.38□□□□□ -1.55
PDX1P52945 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.38□□□□□ -1.55
PDX1P52945 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.38□□□□□ -1.55
PDX1P52945 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.38□□□□□ -1.55
PDX1P52945 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.38□□□□□ -1.55
PDX1P52945 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
PDX1P52945 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.38□□□□□ -1.55
PDX1P52945 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDX1P52945 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PDX1P52945 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDX1P52945 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.38□□□□□ -1.55
PDX1P52945 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDX1P52945 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
PDX1P52945 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
PDX1P52945 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDX1P52945 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.38□□□□□ -1.55
PDX1P52945 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
PDX1P52945 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
PDX1P52945 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
PDX1P52945 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
PDX1P52945 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.37□□□□□ -1.55
PDX1P52945 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDX1P52945 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
PDX1P52945 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.37□□□□□ -1.55
PDX1P52945 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PDX1P52945 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDX1P52945 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDX1P52945 AL031595.2-201ENST00000624215 19071 ntBASIC5.37□□□□□ -1.55
PDX1P52945 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PDX1P52945 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.37□□□□□ -1.55
PDX1P52945 RNU6-152P-201ENST00000384037 107 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms