Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC079355.1-201ENST00000421770 223 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 AL133173.1-201ENST00000423458 397 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCNKAP51800 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.53□□□□□ -1.52
CLCNKAP51800 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCNKAP51800 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCNKAP51800 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCNKAP51800 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCNKAP51800 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCNKAP51800 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCNKAP51800 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.53□□□□□ -1.52
CLCNKAP51800 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCNKAP51800 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CLCNKAP51800 DUTP7-201ENST00000507982 486 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCNKAP51800 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCNKAP51800 AC008628.1-201ENST00000508663 265 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
CLCNKAP51800 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCNKAP51800 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCNKAP51800 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCNKAP51800 AC005000.1-201ENST00000536192 288 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCNKAP51800 RBM22P12-201ENST00000567098 1255 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 AP001357.1-201ENST00000586304 1053 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 AC025857.2-201ENST00000602711 238 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.53□□□□□ -1.52
CLCNKAP51800 AL451049.1-201ENST00000608672 497 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 AP000240.1-201ENST00000609910 452 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 AC006453.5-201ENST00000636451 619 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCNKAP51800 AC119674.1-220ENST00000641502 1048 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCNKAP51800 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CLCNKAP51800 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CLCNKAP51800 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CLCNKAP51800 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCNKAP51800 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLCNKAP51800 AP005435.3-201ENST00000531260 3198 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.53□□□□□ -1.52
CLCNKAP51800 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLCNKAP51800 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCNKAP51800 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCNKAP51800 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.52□□□□□ -1.53
CLCNKAP51800 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCNKAP51800 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCNKAP51800 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCNKAP51800 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCNKAP51800 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCNKAP51800 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCNKAP51800 RNU1-136P-201ENST00000384181 164 ntBASIC5.52□□□□□ -1.53
CLCNKAP51800 MIR137-201ENST00000385223 102 ntBASIC5.52□□□□□ -1.53
CLCNKAP51800 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCNKAP51800 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCNKAP51800 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.52□□□□□ -1.53
CLCNKAP51800 OR3A2-201ENST00000408891 1076 ntBASIC5.52□□□□□ -1.53
CLCNKAP51800 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.52□□□□□ -1.53
CLCNKAP51800 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.52□□□□□ -1.53
CLCNKAP51800 AL354766.1-201ENST00000423396 542 ntBASIC5.52□□□□□ -1.53
CLCNKAP51800 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.52□□□□□ -1.53
CLCNKAP51800 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCNKAP51800 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.52□□□□□ -1.53
CLCNKAP51800 AC006335.2-201ENST00000437993 330 ntBASIC5.52□□□□□ -1.53
CLCNKAP51800 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.52□□□□□ -1.53
CLCNKAP51800 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.52□□□□□ -1.53
CLCNKAP51800 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCNKAP51800 AP000547.1-201ENST00000454360 617 ntBASIC5.52□□□□□ -1.53
CLCNKAP51800 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.52□□□□□ -1.53
CLCNKAP51800 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.52□□□□□ -1.53
CLCNKAP51800 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.52□□□□□ -1.53
CLCNKAP51800 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCNKAP51800 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCNKAP51800 AC011411.1-201ENST00000509592 876 ntBASIC5.52□□□□□ -1.53
CLCNKAP51800 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCNKAP51800 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCNKAP51800 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCNKAP51800 AC139697.1-201ENST00000548429 745 ntBASIC5.52□□□□□ -1.53
CLCNKAP51800 AL358913.1-201ENST00000554342 121 ntBASIC5.52□□□□□ -1.53
CLCNKAP51800 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.52□□□□□ -1.53
CLCNKAP51800 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.52□□□□□ -1.53
CLCNKAP51800 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCNKAP51800 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.52□□□□□ -1.53
CLCNKAP51800 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.52□□□□□ -1.53
CLCNKAP51800 OR4H6P-202ENST00000603819 340 ntBASIC5.52□□□□□ -1.53
CLCNKAP51800 PPATP2-201ENST00000605635 508 ntBASIC5.52□□□□□ -1.53
CLCNKAP51800 AC024933.1-201ENST00000608472 348 ntBASIC5.52□□□□□ -1.53
CLCNKAP51800 MIR6886-201ENST00000619864 61 ntBASIC5.52□□□□□ -1.53
CLCNKAP51800 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.52□□□□□ -1.53
CLCNKAP51800 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCNKAP51800 HSPD1P7-201ENST00000447985 1686 ntBASIC5.52□□□□□ -1.53
CLCNKAP51800 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
CLCNKAP51800 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.52□□□□□ -1.53
CLCNKAP51800 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCNKAP51800 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCNKAP51800 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCNKAP51800 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCNKAP51800 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCNKAP51800 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms