Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HOXC8P31273 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HOXC8P31273 NUDT19P3-201ENST00000404698 555 ntBASIC5.94□□□□□ -1.46
HOXC8P31273 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC8P31273 RPL7P56-201ENST00000429441 717 ntBASIC5.94□□□□□ -1.46
HOXC8P31273 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXC8P31273 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC8P31273 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC8P31273 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HOXC8P31273 Z92846.1-201ENST00000456203 268 ntBASIC5.94□□□□□ -1.46
HOXC8P31273 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC8P31273 AC109464.1-201ENST00000511091 819 ntBASIC5.94□□□□□ -1.46
HOXC8P31273 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXC8P31273 GAPDHP62-201ENST00000515313 990 ntBASIC5.94□□□□□ -1.46
HOXC8P31273 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC8P31273 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC8P31273 CDH12P4-201ENST00000517835 295 ntBASIC5.94□□□□□ -1.46
HOXC8P31273 CDH12P3-201ENST00000517935 295 ntBASIC5.94□□□□□ -1.46
HOXC8P31273 CDH12P1-201ENST00000518435 295 ntBASIC5.94□□□□□ -1.46
HOXC8P31273 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC8P31273 OR11H3P-201ENST00000554547 982 ntBASIC5.94□□□□□ -1.46
HOXC8P31273 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC8P31273 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXC8P31273 AC114947.2-201ENST00000565748 2125 ntBASIC5.94□□□□□ -1.46
HOXC8P31273 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC8P31273 RN7SL356P-201ENST00000582228 248 ntBASIC5.94□□□□□ -1.46
HOXC8P31273 AC009303.3-201ENST00000591103 736 ntBASIC5.94□□□□□ -1.46
HOXC8P31273 AP000769.2-201ENST00000602344 396 ntBASIC5.94□□□□□ -1.46
HOXC8P31273 OR7M1P-201ENST00000608946 533 ntBASIC5.94□□□□□ -1.46
HOXC8P31273 AL136295.6-201ENST00000610486 658 ntBASIC5.94□□□□□ -1.46
HOXC8P31273 AC135068.5-201ENST00000624197 983 ntBASIC5.94□□□□□ -1.46
HOXC8P31273 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC8P31273 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC8P31273 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC8P31273 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HOXC8P31273 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC8P31273 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC8P31273 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC8P31273 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC8P31273 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC8P31273 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC8P31273 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC8P31273 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
HOXC8P31273 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
HOXC8P31273 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC8P31273 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC8P31273 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC8P31273 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC8P31273 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC8P31273 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC8P31273 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC8P31273 RNA5SP443-201ENST00000363083 132 ntBASIC5.93□□□□□ -1.46
HOXC8P31273 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC8P31273 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HOXC8P31273 AC092651.1-201ENST00000426110 312 ntBASIC5.93□□□□□ -1.46
HOXC8P31273 AC097523.2-201ENST00000435551 652 ntBASIC5.93□□□□□ -1.46
HOXC8P31273 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC8P31273 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC8P31273 HIGD1AP8-201ENST00000453927 274 ntBASIC5.93□□□□□ -1.46
HOXC8P31273 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC8P31273 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC8P31273 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HOXC8P31273 OR52A4P-203ENST00000498233 1014 ntBASIC5.93□□□□□ -1.46
HOXC8P31273 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXC8P31273 OR5AZ1P-201ENST00000527448 943 ntBASIC5.93□□□□□ -1.46
HOXC8P31273 AC134349.2-201ENST00000535136 910 ntBASIC5.93□□□□□ -1.46
HOXC8P31273 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC8P31273 AP002884.5-201ENST00000595053 1132 ntBASIC5.93□□□□□ -1.46
HOXC8P31273 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC8P31273 AC117490.2-201ENST00000610042 594 ntBASIC5.93□□□□□ -1.46
HOXC8P31273 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC8P31273 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXC8P31273 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC8P31273 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
HOXC8P31273 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC8P31273 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HOXC8P31273 MTCO1P8-201ENST00000416914 1523 ntBASIC5.93□□□□□ -1.46
HOXC8P31273 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
HOXC8P31273 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXC8P31273 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXC8P31273 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
HOXC8P31273 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC8P31273 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC8P31273 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC8P31273 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXC8P31273 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC8P31273 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXC8P31273 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC8P31273 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC8P31273 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC8P31273 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC8P31273 RN7SKP104-201ENST00000362605 328 ntBASIC5.92□□□□□ -1.46
HOXC8P31273 RNU6-386P-201ENST00000362650 107 ntBASIC5.92□□□□□ -1.46
HOXC8P31273 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXC8P31273 RNU6-891P-201ENST00000384280 111 ntBASIC5.92□□□□□ -1.46
HOXC8P31273 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HOXC8P31273 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.92□□□□□ -1.46
HOXC8P31273 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXC8P31273 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HOXC8P31273 AC234781.4-201ENST00000419384 244 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms