Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.81□□□□□ -1.64
CD40LGP29965 AC104843.2-201ENST00000427666 297 ntBASIC4.81□□□□□ -1.64
CD40LGP29965 GAPDHP48-201ENST00000436626 961 ntBASIC4.81□□□□□ -1.64
CD40LGP29965 TUBB4BP6-201ENST00000437576 479 ntBASIC4.81□□□□□ -1.64
CD40LGP29965 AL450263.2-201ENST00000439400 589 ntBASIC4.81□□□□□ -1.64
CD40LGP29965 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.81□□□□□ -1.64
CD40LGP29965 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.81□□□□□ -1.64
CD40LGP29965 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.81□□□□□ -1.64
CD40LGP29965 RN7SL168P-201ENST00000463821 279 ntBASIC4.81□□□□□ -1.64
CD40LGP29965 RPL15P21-201ENST00000495592 567 ntBASIC4.81□□□□□ -1.64
CD40LGP29965 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.81□□□□□ -1.64
CD40LGP29965 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.81□□□□□ -1.64
CD40LGP29965 AL845552.1-201ENST00000556820 323 ntBASIC4.81□□□□□ -1.64
CD40LGP29965 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.81□□□□□ -1.64
CD40LGP29965 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.81□□□□□ -1.64
CD40LGP29965 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.81□□□□□ -1.64
CD40LGP29965 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.81□□□□□ -1.64
CD40LGP29965 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.81□□□□□ -1.64
CD40LGP29965 TAS2R6P-201ENST00000605022 826 ntBASIC4.81□□□□□ -1.64
CD40LGP29965 SNORD91B-202ENST00000608459 222 ntBASIC4.81□□□□□ -1.64
CD40LGP29965 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.81□□□□□ -1.64
CD40LGP29965 AL359091.2-201ENST00000609303 556 ntBASIC4.81□□□□□ -1.64
CD40LGP29965 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.81□□□□□ -1.64
CD40LGP29965 MIR6889-201ENST00000613185 59 ntBASIC4.81□□□□□ -1.64
CD40LGP29965 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.81□□□□□ -1.64
CD40LGP29965 AL591926.1-201ENST00000620542 217 ntBASIC4.81□□□□□ -1.64
CD40LGP29965 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.81□□□□□ -1.64
CD40LGP29965 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD40LGP29965 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD40LGP29965 AC015813.6-201ENST00000624409 5808 ntBASIC4.81□□□□□ -1.64
CD40LGP29965 THAP12P8-201ENST00000447914 2115 ntBASIC4.81□□□□□ -1.64
CD40LGP29965 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.81□□□□□ -1.64
CD40LGP29965 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.81□□□□□ -1.64
CD40LGP29965 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD40LGP29965 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.8□□□□□ -1.64
CD40LGP29965 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CD40LGP29965 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CD40LGP29965 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CD40LGP29965 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.8□□□□□ -1.64
CD40LGP29965 AC079298.1-201ENST00000625026 1619 ntBASIC4.8□□□□□ -1.64
CD40LGP29965 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.8□□□□□ -1.64
CD40LGP29965 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD40LGP29965 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.8□□□□□ -1.64
CD40LGP29965 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.8□□□□□ -1.64
CD40LGP29965 SNORA21-201ENST00000362423 132 ntBASIC4.8□□□□□ -1.64
CD40LGP29965 RNU1-19P-201ENST00000363306 165 ntBASIC4.8□□□□□ -1.64
CD40LGP29965 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.8□□□□□ -1.64
CD40LGP29965 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.8□□□□□ -1.64
CD40LGP29965 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.8□□□□□ -1.64
CD40LGP29965 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.8□□□□□ -1.64
CD40LGP29965 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.8□□□□□ -1.64
CD40LGP29965 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.8□□□□□ -1.64
CD40LGP29965 AL450023.1-201ENST00000450868 751 ntBASIC4.8□□□□□ -1.64
CD40LGP29965 AL445433.1-201ENST00000457507 257 ntBASIC4.8□□□□□ -1.64
CD40LGP29965 CYCSP34-201ENST00000458172 304 ntBASIC4.8□□□□□ -1.64
CD40LGP29965 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CD40LGP29965 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.8□□□□□ -1.64
CD40LGP29965 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.8□□□□□ -1.64
CD40LGP29965 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.8□□□□□ -1.64
CD40LGP29965 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.8□□□□□ -1.64
CD40LGP29965 RN7SKP183-201ENST00000517169 324 ntBASIC4.8□□□□□ -1.64
CD40LGP29965 AC105031.1-201ENST00000518550 476 ntBASIC4.8□□□□□ -1.64
CD40LGP29965 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.8□□□□□ -1.64
CD40LGP29965 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD40LGP29965 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.8□□□□□ -1.64
CD40LGP29965 AC091078.2-201ENST00000557145 559 ntBASIC4.8□□□□□ -1.64
CD40LGP29965 AC026826.3-201ENST00000561747 158 ntBASIC4.8□□□□□ -1.64
CD40LGP29965 AC007346.1-201ENST00000569208 867 ntBASIC4.8□□□□□ -1.64
CD40LGP29965 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.8□□□□□ -1.64
CD40LGP29965 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.8□□□□□ -1.64
CD40LGP29965 RNF138P2-201ENST00000603490 592 ntBASIC4.8□□□□□ -1.64
CD40LGP29965 AC067838.1-201ENST00000606064 577 ntBASIC4.8□□□□□ -1.64
CD40LGP29965 AC009779.8-202ENST00000607990 932 ntBASIC4.8□□□□□ -1.64
CD40LGP29965 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD40LGP29965 AL021918.2-201ENST00000613415 194 ntBASIC4.8□□□□□ -1.64
CD40LGP29965 AC245014.3-201ENST00000618589 347 ntBASIC4.8□□□□□ -1.64
CD40LGP29965 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.8□□□□□ -1.64
CD40LGP29965 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.8□□□□□ -1.64
CD40LGP29965 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.8□□□□□ -1.64
CD40LGP29965 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.8□□□□□ -1.64
CD40LGP29965 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
CD40LGP29965 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CD40LGP29965 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.8□□□□□ -1.64
CD40LGP29965 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD40LGP29965 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CD40LGP29965 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CD40LGP29965 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
CD40LGP29965 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.8□□□□□ -1.64
CD40LGP29965 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.8□□□□□ -1.64
CD40LGP29965 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CD40LGP29965 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.8□□□□□ -1.64
CD40LGP29965 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD40LGP29965 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CD40LGP29965 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD40LGP29965 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD40LGP29965 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD40LGP29965 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.79□□□□□ -1.64
CD40LGP29965 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.79□□□□□ -1.64
CD40LGP29965 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CD40LGP29965 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms