Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TNFRSF1BP20333 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TNFRSF1BP20333 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TNFRSF1BP20333 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
TNFRSF1BP20333 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
TNFRSF1BP20333 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
TNFRSF1BP20333 MTND5P31-201ENST00000419366 1374 ntBASIC5.28□□□□□ -1.56
TNFRSF1BP20333 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TNFRSF1BP20333 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TNFRSF1BP20333 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AL121886.1-201ENST00000358609 435 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 MIR16-2-201ENST00000362117 81 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 RPL22P22-201ENST00000395439 379 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 CXADRP1-201ENST00000398098 1095 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 ZNF602P-201ENST00000405929 924 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 MRPL53P1-201ENST00000414323 319 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 THEM7P-201ENST00000419556 672 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC005005.2-201ENST00000420779 380 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 PTP4A1P7-201ENST00000423476 514 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 MTND5P25-201ENST00000430499 799 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 RPL12P28-201ENST00000430852 489 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 MTCO1P45-201ENST00000431457 267 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 MTND2P5-201ENST00000432656 1006 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 MTND2P22-201ENST00000444325 1033 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AL096829.2-201ENST00000446582 742 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 KF459542.1-201ENST00000450908 553 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 PPM1AP1-201ENST00000502740 1135 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 RNA5SP340-201ENST00000517132 107 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC012321.1-201ENST00000561622 1588 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC005244.1-201ENST00000582566 339 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC005242.1-201ENST00000585658 438 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC008751.2-201ENST00000597885 980 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC011492.1-201ENST00000600023 315 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC011500.1-201ENST00000601963 469 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC026741.1-201ENST00000605892 482 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC124016.2-201ENST00000610058 665 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 CXADRP3-202ENST00000617265 1100 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AC026422.1-201ENST00000623961 452 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 HSPD1P7-201ENST00000447985 1686 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 QRSL1P1-201ENST00000400977 1540 ntBASIC5.27□□□□□ -1.57
TNFRSF1BP20333 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFRSF1BP20333 HSPD1P9-201ENST00000420325 1636 ntBASIC5.26□□□□□ -1.57
TNFRSF1BP20333 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFRSF1BP20333 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFRSF1BP20333 AP001029.2-203ENST00000589795 4910 ntBASIC5.26□□□□□ -1.57
TNFRSF1BP20333 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFRSF1BP20333 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFRSF1BP20333 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TNFRSF1BP20333 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFRSF1BP20333 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
TNFRSF1BP20333 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFRSF1BP20333 RN7SKP250-201ENST00000363924 321 ntBASIC5.26□□□□□ -1.57
TNFRSF1BP20333 RNA5SP500-201ENST00000364486 119 ntBASIC5.26□□□□□ -1.57
TNFRSF1BP20333 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TNFRSF1BP20333 U3.28-201ENST00000391249 210 ntBASIC5.26□□□□□ -1.57
TNFRSF1BP20333 AL050305.1-201ENST00000399993 1230 ntBASIC5.26□□□□□ -1.57
TNFRSF1BP20333 ST13P16-201ENST00000401760 781 ntBASIC5.26□□□□□ -1.57
TNFRSF1BP20333 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms