Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.57□□□□□ -1.2
ERCC3P19447 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC7.57□□□□□ -1.2
ERCC3P19447 NDUFA5P5-201ENST00000468361 342 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 AC011979.1-201ENST00000472300 483 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 AL355032.1-201ENST00000472981 438 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 RPS3AP43-201ENST00000479743 781 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 AC073522.1-201ENST00000483312 377 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC7.57□□□□□ -1.2
ERCC3P19447 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.57□□□□□ -1.2
ERCC3P19447 SCARNA5-201ENST00000516201 276 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC7.57□□□□□ -1.2
ERCC3P19447 AC010306.1-201ENST00000523223 1117 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
ERCC3P19447 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.57□□□□□ -1.2
ERCC3P19447 AL133399.1-201ENST00000527476 298 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC7.57□□□□□ -1.2
ERCC3P19447 AP002812.4-201ENST00000532139 286 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.57□□□□□ -1.2
ERCC3P19447 NPM1P47-201ENST00000560843 856 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 AC002310.3-201ENST00000569728 723 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.57□□□□□ -1.2
ERCC3P19447 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC7.57□□□□□ -1.2
ERCC3P19447 AC011921.2-201ENST00000589465 152 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 AL589863.1-201ENST00000595383 631 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 EIF1P6-201ENST00000600054 334 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 AC124916.2-201ENST00000604416 224 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 AC107075.1-201ENST00000613695 314 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 AC103706.2-201ENST00000638080 240 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
ERCC3P19447 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
ERCC3P19447 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
ERCC3P19447 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.57□□□□□ -1.2
ERCC3P19447 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.57□□□□□ -1.2
ERCC3P19447 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
ERCC3P19447 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.57□□□□□ -1.2
ERCC3P19447 MTCO1P6-201ENST00000481192 1384 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 QRSL1P1-201ENST00000400977 1540 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.57□□□□□ -1.2
ERCC3P19447 TTC39DP-201ENST00000416781 1688 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
ERCC3P19447 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC7.56□□□□□ -1.2
ERCC3P19447 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.56□□□□□ -1.2
ERCC3P19447 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
ERCC3P19447 AC079949.2-201ENST00000617117 2933 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
ERCC3P19447 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
ERCC3P19447 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.56□□□□□ -1.2
ERCC3P19447 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
ERCC3P19447 ZNF402P-201ENST00000404435 3100 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
ERCC3P19447 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
ERCC3P19447 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
ERCC3P19447 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
ERCC3P19447 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC7.56□□□□□ -1.2
ERCC3P19447 RNA5SP65-201ENST00000363166 119 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 RNU1-24P-201ENST00000364285 165 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.56□□□□□ -1.2
ERCC3P19447 RN7SKP271-201ENST00000410528 320 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 AL035422.1-201ENST00000414193 397 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 TNPO1P1-201ENST00000423641 1138 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC7.56□□□□□ -1.2
ERCC3P19447 CNOT7P1-201ENST00000429006 852 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 AC005345.1-201ENST00000431868 217 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 AC069154.1-201ENST00000432914 542 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.56□□□□□ -1.2
ERCC3P19447 CRYGGP-201ENST00000443337 145 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 TVP23CP1-201ENST00000450317 639 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
ERCC3P19447 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.56□□□□□ -1.2
ERCC3P19447 GM2AP2-201ENST00000491764 562 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 AC104971.1-201ENST00000495117 578 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 RPL19P11-201ENST00000495944 589 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 H3F3AP3-201ENST00000497682 407 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 AC008429.2-201ENST00000523057 864 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 CYCSP25-201ENST00000525280 316 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
ERCC3P19447 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.56□□□□□ -1.2
ERCC3P19447 AC092747.2-201ENST00000545069 983 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC7.56□□□□□ -1.2
ERCC3P19447 MIR3912-201ENST00000577566 105 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC7.56□□□□□ -1.2
ERCC3P19447 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.56□□□□□ -1.2
ERCC3P19447 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.56□□□□□ -1.2
ERCC3P19447 GLYATL1P2-202ENST00000588046 902 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.56□□□□□ -1.2
ERCC3P19447 U1.41-201ENST00000617626 165 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 U1.31-201ENST00000620022 160 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 AC018659.2-201ENST00000624690 715 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.56□□□□□ -1.2
ERCC3P19447 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
ERCC3P19447 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
ERCC3P19447 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
ERCC3P19447 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
ERCC3P19447 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.56□□□□□ -1.2
ERCC3P19447 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
ERCC3P19447 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.55□□□□□ -1.2
ERCC3P19447 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.55□□□□□ -1.2
ERCC3P19447 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
ERCC3P19447 AC093278.2-201ENST00000564956 2485 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms