Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RPL23AP44-201ENST00000482216 473 ntBASIC7.41□□□□□ -1.22
LIG1P18858 AC012123.2-201ENST00000485809 248 ntBASIC7.41□□□□□ -1.22
LIG1P18858 SUMO1P1-201ENST00000497904 306 ntBASIC7.41□□□□□ -1.22
LIG1P18858 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 RNU6-720P-201ENST00000516363 108 ntBASIC7.41□□□□□ -1.22
LIG1P18858 OR9G2P-201ENST00000533326 880 ntBASIC7.41□□□□□ -1.22
LIG1P18858 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7.41□□□□□ -1.22
LIG1P18858 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 AL049830.4-201ENST00000555149 351 ntBASIC7.41□□□□□ -1.22
LIG1P18858 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.41□□□□□ -1.22
LIG1P18858 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC7.41□□□□□ -1.22
LIG1P18858 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.41□□□□□ -1.22
LIG1P18858 AC021483.2-201ENST00000567415 758 ntBASIC7.41□□□□□ -1.22
LIG1P18858 AL121834.1-201ENST00000572284 509 ntBASIC7.41□□□□□ -1.22
LIG1P18858 AC022662.1-201ENST00000580252 331 ntBASIC7.41□□□□□ -1.22
LIG1P18858 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.41□□□□□ -1.22
LIG1P18858 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.41□□□□□ -1.22
LIG1P18858 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC7.41□□□□□ -1.22
LIG1P18858 AL139286.2-201ENST00000606838 396 ntBASIC7.41□□□□□ -1.22
LIG1P18858 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC7.41□□□□□ -1.22
LIG1P18858 AC109347.2-201ENST00000610220 349 ntBASIC7.41□□□□□ -1.22
LIG1P18858 MIR6503-201ENST00000622884 86 ntBASIC7.41□□□□□ -1.22
LIG1P18858 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.41□□□□□ -1.22
LIG1P18858 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.41□□□□□ -1.22
LIG1P18858 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
LIG1P18858 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.41□□□□□ -1.22
LIG1P18858 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC7.41□□□□□ -1.22
LIG1P18858 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.41□□□□□ -1.22
LIG1P18858 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.41□□□□□ -1.22
LIG1P18858 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
LIG1P18858 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 AC105235.1-201ENST00000623208 1816 ntBASIC7.41□□□□□ -1.22
LIG1P18858 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.4□□□□□ -1.22
LIG1P18858 AC005225.5-201ENST00000623547 2225 ntBASIC7.4□□□□□ -1.22
LIG1P18858 AC018628.1-201ENST00000624147 3819 ntBASIC7.4□□□□□ -1.22
LIG1P18858 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LIG1P18858 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LIG1P18858 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
LIG1P18858 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
LIG1P18858 MTCO1P56-201ENST00000401674 224 ntBASIC7.4□□□□□ -1.22
LIG1P18858 AL390774.1-201ENST00000411924 246 ntBASIC7.4□□□□□ -1.22
LIG1P18858 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC7.4□□□□□ -1.22
LIG1P18858 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.4□□□□□ -1.22
LIG1P18858 P2RY10P2-201ENST00000416730 913 ntBASIC7.4□□□□□ -1.22
LIG1P18858 AL133325.1-201ENST00000421090 382 ntBASIC7.4□□□□□ -1.22
LIG1P18858 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.4□□□□□ -1.22
LIG1P18858 AL356121.1-201ENST00000442911 156 ntBASIC7.4□□□□□ -1.22
LIG1P18858 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.4□□□□□ -1.22
LIG1P18858 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC7.4□□□□□ -1.22
LIG1P18858 CCNB1IP1P3-201ENST00000454702 829 ntBASIC7.4□□□□□ -1.22
LIG1P18858 AC015524.1-201ENST00000491585 472 ntBASIC7.4□□□□□ -1.22
LIG1P18858 RPL5P14-201ENST00000494197 878 ntBASIC7.4□□□□□ -1.22
LIG1P18858 RN7SL612P-201ENST00000497704 295 ntBASIC7.4□□□□□ -1.22
LIG1P18858 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC7.4□□□□□ -1.22
LIG1P18858 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC7.4□□□□□ -1.22
LIG1P18858 NDUFB4P12-201ENST00000513465 390 ntBASIC7.4□□□□□ -1.22
LIG1P18858 MINOS1P4-201ENST00000515470 318 ntBASIC7.4□□□□□ -1.22
LIG1P18858 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LIG1P18858 RN7SKP196-201ENST00000516267 345 ntBASIC7.4□□□□□ -1.22
LIG1P18858 RNU6-759P-201ENST00000516740 103 ntBASIC7.4□□□□□ -1.22
LIG1P18858 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.4□□□□□ -1.22
LIG1P18858 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.4□□□□□ -1.22
LIG1P18858 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LIG1P18858 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.4□□□□□ -1.22
LIG1P18858 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC7.4□□□□□ -1.22
LIG1P18858 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LIG1P18858 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC7.4□□□□□ -1.22
LIG1P18858 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC7.4□□□□□ -1.22
LIG1P18858 AC068135.2-201ENST00000569293 1028 ntBASIC7.4□□□□□ -1.22
LIG1P18858 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC7.4□□□□□ -1.22
LIG1P18858 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.4□□□□□ -1.22
LIG1P18858 MIR4732-201ENST00000581873 76 ntBASIC7.4□□□□□ -1.22
LIG1P18858 AC015688.2-201ENST00000584523 262 ntBASIC7.4□□□□□ -1.22
LIG1P18858 AC005771.1-201ENST00000585581 349 ntBASIC7.4□□□□□ -1.22
LIG1P18858 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.4□□□□□ -1.22
LIG1P18858 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LIG1P18858 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
LIG1P18858 U1.34-201ENST00000618578 162 ntBASIC7.4□□□□□ -1.22
LIG1P18858 AC073968.1-201ENST00000618594 637 ntBASIC7.4□□□□□ -1.22
LIG1P18858 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC7.4□□□□□ -1.22
LIG1P18858 AL596275.2-207ENST00000641188 675 ntBASIC7.4□□□□□ -1.22
LIG1P18858 AC119674.1-213ENST00000641177 1386 ntBASIC7.4□□□□□ -1.22
LIG1P18858 AL359715.4-201ENST00000606629 1436 ntBASIC7.4□□□□□ -1.22
LIG1P18858 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LIG1P18858 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.4□□□□□ -1.22
LIG1P18858 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.4□□□□□ -1.22
LIG1P18858 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
LIG1P18858 CASC19-281ENST00000642118 1554 ntBASIC7.4□□□□□ -1.22
LIG1P18858 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
LIG1P18858 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
LIG1P18858 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.23
LIG1P18858 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.4□□□□□ -1.23
LIG1P18858 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.23
LIG1P18858 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms