Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MIR143-201ENST00000385300 106 ntBASIC5.75□□□□□ -1.49
PDGFRAP16234 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFRAP16234 OR3A2-201ENST00000408891 1076 ntBASIC5.75□□□□□ -1.49
PDGFRAP16234 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFRAP16234 SNORA79B-201ENST00000410557 148 ntBASIC5.75□□□□□ -1.49
PDGFRAP16234 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFRAP16234 RPS20P25-201ENST00000412447 352 ntBASIC5.75□□□□□ -1.49
PDGFRAP16234 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFRAP16234 MRPS21P2-201ENST00000424704 264 ntBASIC5.75□□□□□ -1.49
PDGFRAP16234 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.75□□□□□ -1.49
PDGFRAP16234 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.75□□□□□ -1.49
PDGFRAP16234 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.75□□□□□ -1.49
PDGFRAP16234 RAD1P2-201ENST00000446414 663 ntBASIC5.75□□□□□ -1.49
PDGFRAP16234 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFRAP16234 AC091912.1-201ENST00000511351 248 ntBASIC5.75□□□□□ -1.49
PDGFRAP16234 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PDGFRAP16234 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFRAP16234 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFRAP16234 AL358913.1-201ENST00000554342 121 ntBASIC5.75□□□□□ -1.49
PDGFRAP16234 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.75□□□□□ -1.49
PDGFRAP16234 NPM1P45-201ENST00000583151 559 ntBASIC5.75□□□□□ -1.49
PDGFRAP16234 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.75□□□□□ -1.49
PDGFRAP16234 AC109309.2-201ENST00000612597 332 ntBASIC5.75□□□□□ -1.49
PDGFRAP16234 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFRAP16234 AC007786.3-201ENST00000615154 596 ntBASIC5.75□□□□□ -1.49
PDGFRAP16234 AL118522.2-201ENST00000616045 615 ntBASIC5.75□□□□□ -1.49
PDGFRAP16234 AC074140.1-201ENST00000621617 208 ntBASIC5.75□□□□□ -1.49
PDGFRAP16234 AC073869.8-201ENST00000641806 335 ntBASIC5.75□□□□□ -1.49
PDGFRAP16234 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFRAP16234 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.75□□□□□ -1.49
PDGFRAP16234 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFRAP16234 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFRAP16234 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PDGFRAP16234 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFRAP16234 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFRAP16234 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFRAP16234 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFRAP16234 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFRAP16234 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFRAP16234 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.74□□□□□ -1.49
PDGFRAP16234 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PDGFRAP16234 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFRAP16234 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.74□□□□□ -1.49
PDGFRAP16234 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFRAP16234 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFRAP16234 AC010266.2-201ENST00000564741 3255 ntBASIC5.74□□□□□ -1.49
PDGFRAP16234 AC093849.1-201ENST00000563631 2209 ntBASIC5.74□□□□□ -1.49
PDGFRAP16234 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFRAP16234 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PDGFRAP16234 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFRAP16234 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFRAP16234 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PDGFRAP16234 RNA5SP132-201ENST00000364725 118 ntBASIC5.74□□□□□ -1.49
PDGFRAP16234 SNORA70.6-201ENST00000383934 134 ntBASIC5.74□□□□□ -1.49
PDGFRAP16234 SNORD56.6-201ENST00000384569 71 ntBASIC5.74□□□□□ -1.49
PDGFRAP16234 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.74□□□□□ -1.49
PDGFRAP16234 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.74□□□□□ -1.49
PDGFRAP16234 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.74□□□□□ -1.49
PDGFRAP16234 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFRAP16234 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.74□□□□□ -1.49
PDGFRAP16234 MTCO1P51-201ENST00000427672 1060 ntBASIC5.74□□□□□ -1.49
PDGFRAP16234 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.74□□□□□ -1.49
PDGFRAP16234 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFRAP16234 EIF3LP3-201ENST00000495197 822 ntBASIC5.74□□□□□ -1.49
PDGFRAP16234 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFRAP16234 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.74□□□□□ -1.49
PDGFRAP16234 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFRAP16234 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFRAP16234 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.74□□□□□ -1.49
PDGFRAP16234 AP000859.1-201ENST00000525536 307 ntBASIC5.74□□□□□ -1.49
PDGFRAP16234 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.74□□□□□ -1.49
PDGFRAP16234 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFRAP16234 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFRAP16234 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFRAP16234 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.74□□□□□ -1.49
PDGFRAP16234 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFRAP16234 AL590410.1-201ENST00000617925 333 ntBASIC5.74□□□□□ -1.49
PDGFRAP16234 AC021766.1-201ENST00000624404 741 ntBASIC5.74□□□□□ -1.49
PDGFRAP16234 GVINP1-202ENST00000531871 7271 ntBASIC5.74□□□□□ -1.49
PDGFRAP16234 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFRAP16234 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.74□□□□□ -1.49
PDGFRAP16234 TTC39DP-201ENST00000416781 1688 ntBASIC5.74□□□□□ -1.49
PDGFRAP16234 MTND5P23-201ENST00000430812 1655 ntBASIC5.74□□□□□ -1.49
PDGFRAP16234 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.74□□□□□ -1.49
PDGFRAP16234 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.74□□□□□ -1.49
PDGFRAP16234 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFRAP16234 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFRAP16234 CASC19-260ENST00000641828 2001 ntBASIC5.74□□□□□ -1.49
PDGFRAP16234 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFRAP16234 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PDGFRAP16234 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.74□□□□□ -1.49
PDGFRAP16234 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFRAP16234 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFRAP16234 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
PDGFRAP16234 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFRAP16234 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFRAP16234 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFRAP16234 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFRAP16234 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFRAP16234 AC140134.1-201ENST00000511830 3544 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms