Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.88□□□□□ -1.47
COL11A1P12107 AC073648.4-201ENST00000442655 781 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.88□□□□□ -1.47
COL11A1P12107 AC073264.2-201ENST00000448886 166 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 AC093827.1-201ENST00000480094 861 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 RPL23AP72-201ENST00000492447 435 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.88□□□□□ -1.47
COL11A1P12107 RNA5SP392-201ENST00000516905 112 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.88□□□□□ -1.47
COL11A1P12107 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.88□□□□□ -1.47
COL11A1P12107 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.88□□□□□ -1.47
COL11A1P12107 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.88□□□□□ -1.47
COL11A1P12107 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL11A1P12107 BNIP3P1-201ENST00000547295 580 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.88□□□□□ -1.47
COL11A1P12107 AC019322.1-201ENST00000571869 389 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.88□□□□□ -1.47
COL11A1P12107 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.88□□□□□ -1.47
COL11A1P12107 AC234771.5-201ENST00000600161 514 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 AC011626.1-201ENST00000604710 562 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 AL356608.1-201ENST00000610034 820 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 AC019206.1-201ENST00000621938 425 ntBASIC5.88□□□□□ -1.47
COL11A1P12107 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.88□□□□□ -1.47
COL11A1P12107 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.88□□□□□ -1.47
COL11A1P12107 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL11A1P12107 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
COL11A1P12107 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.87□□□□□ -1.47
COL11A1P12107 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL11A1P12107 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL11A1P12107 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL11A1P12107 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL11A1P12107 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL11A1P12107 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
COL11A1P12107 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.87□□□□□ -1.47
COL11A1P12107 AC010132.2-201ENST00000295493 1043 ntBASIC5.87□□□□□ -1.47
COL11A1P12107 AL590139.1-201ENST00000416267 400 ntBASIC5.87□□□□□ -1.47
COL11A1P12107 BX276092.6-201ENST00000430476 250 ntBASIC5.87□□□□□ -1.47
COL11A1P12107 RPL31P44-201ENST00000447680 377 ntBASIC5.87□□□□□ -1.47
COL11A1P12107 BX276092.8-201ENST00000455722 250 ntBASIC5.87□□□□□ -1.47
COL11A1P12107 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL11A1P12107 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.87□□□□□ -1.47
COL11A1P12107 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.87□□□□□ -1.47
COL11A1P12107 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.87□□□□□ -1.47
COL11A1P12107 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.87□□□□□ -1.47
COL11A1P12107 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.87□□□□□ -1.47
COL11A1P12107 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.87□□□□□ -1.47
COL11A1P12107 AL139124.1-201ENST00000609123 421 ntBASIC5.87□□□□□ -1.47
COL11A1P12107 AL352984.2-202ENST00000613699 155 ntBASIC5.87□□□□□ -1.47
COL11A1P12107 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL11A1P12107 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL11A1P12107 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.87□□□□□ -1.47
COL11A1P12107 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL11A1P12107 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.87□□□□□ -1.47
COL11A1P12107 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL11A1P12107 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL11A1P12107 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL11A1P12107 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL11A1P12107 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.86□□□□□ -1.47
COL11A1P12107 GJA6P-201ENST00000415117 1042 ntBASIC5.86□□□□□ -1.47
COL11A1P12107 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.86□□□□□ -1.47
COL11A1P12107 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.86□□□□□ -1.47
COL11A1P12107 RPL19P16-201ENST00000433839 588 ntBASIC5.86□□□□□ -1.47
COL11A1P12107 AC000111.2-201ENST00000448200 210 ntBASIC5.86□□□□□ -1.47
COL11A1P12107 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.86□□□□□ -1.47
COL11A1P12107 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.86□□□□□ -1.47
COL11A1P12107 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
COL11A1P12107 AC011453.2-201ENST00000603737 729 ntBASIC5.86□□□□□ -1.47
COL11A1P12107 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.86□□□□□ -1.47
COL11A1P12107 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.86□□□□□ -1.47
COL11A1P12107 AC010632.3-201ENST00000611377 369 ntBASIC5.86□□□□□ -1.47
COL11A1P12107 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.86□□□□□ -1.47
COL11A1P12107 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
COL11A1P12107 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL11A1P12107 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL11A1P12107 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
COL11A1P12107 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL11A1P12107 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
COL11A1P12107 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.86□□□□□ -1.47
COL11A1P12107 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL11A1P12107 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL11A1P12107 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.86□□□□□ -1.47
COL11A1P12107 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL11A1P12107 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC5.86□□□□□ -1.47
COL11A1P12107 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
COL11A1P12107 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL11A1P12107 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.86□□□□□ -1.47
COL11A1P12107 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL11A1P12107 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL11A1P12107 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.86□□□□□ -1.47
COL11A1P12107 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
COL11A1P12107 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL11A1P12107 SNORA66-201ENST00000384792 133 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL11A1P12107 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.85□□□□□ -1.47
COL11A1P12107 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.85□□□□□ -1.47
COL11A1P12107 GYG1P1-201ENST00000460864 698 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 RN7SL443P-201ENST00000464331 290 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 RPL7P40-201ENST00000481703 745 ntBASIC5.85□□□□□ -1.47
COL11A1P12107 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.85□□□□□ -1.47
COL11A1P12107 MORF4L1P3-201ENST00000525966 950 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms