Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC074276.2-201ENST00000619891 348 ntBASIC5.33□□□□□ -1.56
RAB40ALP0C0E4 AL133370.2-201ENST00000619934 439 ntBASIC5.33□□□□□ -1.56
RAB40ALP0C0E4 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.33□□□□□ -1.56
RAB40ALP0C0E4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAB40ALP0C0E4 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RAB40ALP0C0E4 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RAB40ALP0C0E4 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAB40ALP0C0E4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
RAB40ALP0C0E4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RAB40ALP0C0E4 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAB40ALP0C0E4 AP004607.3-201ENST00000530354 3915 ntBASIC5.33□□□□□ -1.56
RAB40ALP0C0E4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.33□□□□□ -1.56
RAB40ALP0C0E4 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RAB40ALP0C0E4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAB40ALP0C0E4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAB40ALP0C0E4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RAB40ALP0C0E4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAB40ALP0C0E4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 MIR133A2-201ENST00000347538 102 ntBASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 RNU6-1251P-201ENST00000364502 107 ntBASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 Z93019.1-201ENST00000416450 973 ntBASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 PTP4A1P1-201ENST00000420539 515 ntBASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 AL354766.1-201ENST00000423396 542 ntBASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 AL161722.1-201ENST00000446972 1032 ntBASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 RN7SL51P-201ENST00000468230 285 ntBASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 RPL7P39-201ENST00000481157 744 ntBASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 OR8Q1P-201ENST00000526467 655 ntBASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 SUGT1P3-202ENST00000604259 383 ntBASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 AC132068.1-201ENST00000623805 459 ntBASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 AC079776.5-201ENST00000641920 211 ntBASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 AC005224.3-201ENST00000584683 2140 ntBASIC5.32□□□□□ -1.56
RAB40ALP0C0E4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 U3.7-201ENST00000363668 216 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 U3.10-201ENST00000364459 214 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 RN7SKP28-201ENST00000364770 305 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 MIR130A-201ENST00000385274 89 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 RPL10P10-201ENST00000403509 664 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 RNU4-34P-201ENST00000410431 124 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 AL158827.1-201ENST00000416300 391 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 OR5W1P-201ENST00000423705 938 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 MRPS21P2-201ENST00000424704 264 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 DSTNP5-201ENST00000427921 523 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 ZFAND6P1-201ENST00000434138 605 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 AL157884.3-201ENST00000448273 1184 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 MEMO1P4-201ENST00000453590 386 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 AP000547.1-201ENST00000454360 617 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 RANP1-206ENST00000455094 651 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 AP002345.1-201ENST00000456493 928 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 RN7SL799P-201ENST00000475891 298 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 RN7SL30P-201ENST00000488416 306 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 AC090638.1-201ENST00000498296 909 ntBASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.31□□□□□ -1.56
RAB40ALP0C0E4 HMGB1P47-201ENST00000511281 589 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms