Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC3.13□□□□□ -1.91
APOBP04114 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
APOBP04114 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC3.13□□□□□ -1.91
APOBP04114 RAB9AP4-201ENST00000415230 609 ntBASIC3.13□□□□□ -1.91
APOBP04114 BX510359.2-201ENST00000417920 305 ntBASIC3.13□□□□□ -1.91
APOBP04114 AC006946.1-201ENST00000429106 328 ntBASIC3.13□□□□□ -1.91
APOBP04114 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.13□□□□□ -1.91
APOBP04114 RPL23AP93-201ENST00000440847 484 ntBASIC3.13□□□□□ -1.91
APOBP04114 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.13□□□□□ -1.91
APOBP04114 IGHV5-78-201ENST00000450948 295 ntBASIC3.13□□□□□ -1.91
APOBP04114 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.13□□□□□ -1.91
APOBP04114 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.13□□□□□ -1.91
APOBP04114 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.13□□□□□ -1.91
APOBP04114 KPNA2P3-201ENST00000584190 848 ntBASIC3.13□□□□□ -1.91
APOBP04114 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.13□□□□□ -1.91
APOBP04114 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.13□□□□□ -1.91
APOBP04114 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
APOBP04114 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.13□□□□□ -1.91
APOBP04114 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 CYP1D1P-201ENST00000416662 1433 ntBASIC3.13□□□□□ -1.91
APOBP04114 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC3.13□□□□□ -1.91
APOBP04114 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 SNORD1C-201ENST00000363315 78 ntBASIC3.13□□□□□ -1.91
APOBP04114 CRIP1P1-201ENST00000427567 185 ntBASIC3.13□□□□□ -1.91
APOBP04114 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC3.13□□□□□ -1.91
APOBP04114 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC3.13□□□□□ -1.91
APOBP04114 RPL17P2-201ENST00000491913 451 ntBASIC3.13□□□□□ -1.91
APOBP04114 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.13□□□□□ -1.91
APOBP04114 AC007224.1-201ENST00000564410 144 ntBASIC3.13□□□□□ -1.91
APOBP04114 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC3.13□□□□□ -1.91
APOBP04114 MTCO1P15-201ENST00000529569 1526 ntBASIC3.13□□□□□ -1.91
APOBP04114 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
APOBP04114 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
APOBP04114 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 RAD17P1-201ENST00000418130 2042 ntBASIC3.13□□□□□ -1.91
APOBP04114 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
APOBP04114 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC3.13□□□□□ -1.91
APOBP04114 OR56B2P-202ENST00000641377 2453 ntBASIC3.13□□□□□ -1.91
APOBP04114 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
APOBP04114 GNG5P2-201ENST00000372054 207 ntBASIC3.13□□□□□ -1.91
APOBP04114 MIR670-201ENST00000390142 98 ntBASIC3.13□□□□□ -1.91
APOBP04114 MIR298-201ENST00000401212 88 ntBASIC3.13□□□□□ -1.91
APOBP04114 RPL36AP36-201ENST00000418616 301 ntBASIC3.13□□□□□ -1.91
APOBP04114 AC108751.3-201ENST00000461814 1020 ntBASIC3.13□□□□□ -1.91
APOBP04114 DSTNP2-201ENST00000504533 515 ntBASIC3.13□□□□□ -1.91
APOBP04114 ARL6IP1P3-201ENST00000524544 560 ntBASIC3.13□□□□□ -1.91
APOBP04114 NMNAT1P1-201ENST00000554095 876 ntBASIC3.13□□□□□ -1.91
APOBP04114 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.13□□□□□ -1.91
APOBP04114 AC115286.1-201ENST00000604298 434 ntBASIC3.13□□□□□ -1.91
APOBP04114 AC009027.1-201ENST00000604510 479 ntBASIC3.13□□□□□ -1.91
APOBP04114 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
APOBP04114 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
APOBP04114 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
APOBP04114 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC3.12□□□□□ -1.91
APOBP04114 MIR659-201ENST00000384963 97 ntBASIC3.12□□□□□ -1.91
APOBP04114 AL158073.1-201ENST00000426848 1104 ntBASIC3.12□□□□□ -1.91
APOBP04114 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.12□□□□□ -1.91
APOBP04114 RN7SL319P-201ENST00000480656 221 ntBASIC3.12□□□□□ -1.91
APOBP04114 OR2A3P-201ENST00000493774 953 ntBASIC3.12□□□□□ -1.91
APOBP04114 AC012400.1-201ENST00000518452 381 ntBASIC3.12□□□□□ -1.91
APOBP04114 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.12□□□□□ -1.91
APOBP04114 AL121890.3-201ENST00000618494 516 ntBASIC3.12□□□□□ -1.91
APOBP04114 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC3.12□□□□□ -1.91
APOBP04114 UGP2-232ENST00000640075 567 ntTSL 5 BASIC3.12□□□□□ -1.91
APOBP04114 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC3.12□□□□□ -1.91
APOBP04114 MAPK10-270ENST00000641102 3538 ntBASIC3.12□□□□□ -1.91
APOBP04114 AL359955.1-201ENST00000455242 3275 ntBASIC3.12□□□□□ -1.91
APOBP04114 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
APOBP04114 AL031595.3-201ENST00000624919 14262 ntBASIC3.12□□□□□ -1.91
APOBP04114 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
APOBP04114 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC3.12□□□□□ -1.91
APOBP04114 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
APOBP04114 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC3.12□□□□□ -1.91
APOBP04114 RNU1-13P-201ENST00000384499 162 ntBASIC3.12□□□□□ -1.91
APOBP04114 AL139095.3-201ENST00000419672 1203 ntBASIC3.12□□□□□ -1.91
APOBP04114 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC3.12□□□□□ -1.91
APOBP04114 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.12□□□□□ -1.91
APOBP04114 AC104971.1-201ENST00000495117 578 ntBASIC3.12□□□□□ -1.91
APOBP04114 AP002812.1-201ENST00000495378 474 ntBASIC3.12□□□□□ -1.91
APOBP04114 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC3.12□□□□□ -1.91
APOBP04114 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.12□□□□□ -1.91
APOBP04114 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC3.12□□□□□ -1.91
APOBP04114 MIR6075-201ENST00000620782 95 ntBASIC3.12□□□□□ -1.91
APOBP04114 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
APOBP04114 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC3.12□□□□□ -1.91
APOBP04114 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
APOBP04114 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC3.12□□□□□ -1.91
APOBP04114 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
APOBP04114 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms