Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HCN1O60741 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
HCN1O60741 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
HCN1O60741 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HCN1O60741 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HCN1O60741 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HCN1O60741 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HCN1O60741 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
HCN1O60741 RNA5SP30-201ENST00000365552 115 ntBASIC5.14□□□□□ -1.59
HCN1O60741 U3.28-201ENST00000391249 210 ntBASIC5.14□□□□□ -1.59
HCN1O60741 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.14□□□□□ -1.59
HCN1O60741 Z68694.1-201ENST00000413929 841 ntBASIC5.14□□□□□ -1.59
HCN1O60741 AL133482.1-201ENST00000415988 498 ntBASIC5.14□□□□□ -1.59
HCN1O60741 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.14□□□□□ -1.59
HCN1O60741 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.14□□□□□ -1.59
HCN1O60741 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.14□□□□□ -1.59
HCN1O60741 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.14□□□□□ -1.59
HCN1O60741 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.14□□□□□ -1.59
HCN1O60741 TCEA1P3-201ENST00000443005 880 ntBASIC5.14□□□□□ -1.59
HCN1O60741 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.14□□□□□ -1.59
HCN1O60741 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.14□□□□□ -1.59
HCN1O60741 AC069304.1-201ENST00000491593 704 ntBASIC5.14□□□□□ -1.59
HCN1O60741 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.14□□□□□ -1.59
HCN1O60741 AC108693.1-201ENST00000496068 432 ntBASIC5.14□□□□□ -1.59
HCN1O60741 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.14□□□□□ -1.59
HCN1O60741 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.14□□□□□ -1.59
HCN1O60741 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.14□□□□□ -1.59
HCN1O60741 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.14□□□□□ -1.59
HCN1O60741 PMS2P3-207ENST00000529061 717 ntBASIC5.14□□□□□ -1.59
HCN1O60741 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.14□□□□□ -1.59
HCN1O60741 AC122688.1-201ENST00000541494 223 ntBASIC5.14□□□□□ -1.59
HCN1O60741 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.14□□□□□ -1.59
HCN1O60741 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.14□□□□□ -1.59
HCN1O60741 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HCN1O60741 AC079395.2-201ENST00000610982 737 ntBASIC5.14□□□□□ -1.59
HCN1O60741 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HCN1O60741 AC104964.3-201ENST00000606115 2860 ntBASIC5.14□□□□□ -1.59
HCN1O60741 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HCN1O60741 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.14□□□□□ -1.59
HCN1O60741 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
HCN1O60741 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.14□□□□□ -1.59
HCN1O60741 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.14□□□□□ -1.59
HCN1O60741 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
HCN1O60741 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HCN1O60741 CASC19-248ENST00000641674 1356 ntBASIC5.14□□□□□ -1.59
HCN1O60741 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HCN1O60741 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HCN1O60741 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HCN1O60741 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HCN1O60741 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HCN1O60741 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.13□□□□□ -1.59
HCN1O60741 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.13□□□□□ -1.59
HCN1O60741 AC093849.1-201ENST00000563631 2209 ntBASIC5.13□□□□□ -1.59
HCN1O60741 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HCN1O60741 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HCN1O60741 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HCN1O60741 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.13□□□□□ -1.59
HCN1O60741 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HCN1O60741 AC011755.1-201ENST00000623763 2049 ntBASIC5.13□□□□□ -1.59
HCN1O60741 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.13□□□□□ -1.59
HCN1O60741 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HCN1O60741 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.13□□□□□ -1.59
HCN1O60741 MTND5P23-201ENST00000430812 1655 ntBASIC5.13□□□□□ -1.59
HCN1O60741 RNA5SP326-201ENST00000363209 110 ntBASIC5.13□□□□□ -1.59
HCN1O60741 RNU1-146P-201ENST00000364015 165 ntBASIC5.13□□□□□ -1.59
HCN1O60741 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HCN1O60741 NENFP1-201ENST00000419476 466 ntBASIC5.13□□□□□ -1.59
HCN1O60741 GNG5P5-201ENST00000420444 220 ntBASIC5.13□□□□□ -1.59
HCN1O60741 PTP4A1P1-201ENST00000420539 515 ntBASIC5.13□□□□□ -1.59
HCN1O60741 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.13□□□□□ -1.59
HCN1O60741 OR6C71P-201ENST00000432580 913 ntBASIC5.13□□□□□ -1.59
HCN1O60741 GAPDHP48-201ENST00000436626 961 ntBASIC5.13□□□□□ -1.59
HCN1O60741 NANOGP9-201ENST00000439890 892 ntBASIC5.13□□□□□ -1.59
HCN1O60741 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.13□□□□□ -1.59
HCN1O60741 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.13□□□□□ -1.59
HCN1O60741 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.13□□□□□ -1.59
HCN1O60741 RN7SL177P-201ENST00000476596 299 ntBASIC5.13□□□□□ -1.59
HCN1O60741 RPS4XP14-201ENST00000493072 781 ntBASIC5.13□□□□□ -1.59
HCN1O60741 ENPP7P11-201ENST00000505915 627 ntBASIC5.13□□□□□ -1.59
HCN1O60741 DUTP7-201ENST00000507982 486 ntBASIC5.13□□□□□ -1.59
HCN1O60741 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.13□□□□□ -1.59
HCN1O60741 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.13□□□□□ -1.59
HCN1O60741 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.13□□□□□ -1.59
HCN1O60741 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.13□□□□□ -1.59
HCN1O60741 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HCN1O60741 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.13□□□□□ -1.59
HCN1O60741 LSM3P2-201ENST00000551246 273 ntBASIC5.13□□□□□ -1.59
HCN1O60741 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.13□□□□□ -1.59
HCN1O60741 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.13□□□□□ -1.59
HCN1O60741 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.13□□□□□ -1.59
HCN1O60741 AP000864.1-201ENST00000609424 650 ntBASIC5.13□□□□□ -1.59
HCN1O60741 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.13□□□□□ -1.59
HCN1O60741 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.13□□□□□ -1.59
HCN1O60741 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HCN1O60741 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HCN1O60741 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HCN1O60741 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.13□□□□□ -1.59
HCN1O60741 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HCN1O60741 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HCN1O60741 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms