Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 NDUFA5P12-201ENST00000503796 343 ntBASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 HSPE1P2-201ENST00000554777 306 ntBASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC000068.2-201ENST00000608816 460 ntBASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC116651.1-201ENST00000609724 556 ntBASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC126915.2-201ENST00000610957 190 ntBASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 OR52B5P-202ENST00000641118 1110 ntBASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TMX2-CTNND1H3BSU7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
TMX2-CTNND1H3BSU7 ABCC13-202ENST00000463099 3842 ntBASIC5.34□□□□□ -1.56
TMX2-CTNND1H3BSU7 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
TMX2-CTNND1H3BSU7 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TMX2-CTNND1H3BSU7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
TMX2-CTNND1H3BSU7 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 RNA5SP335-201ENST00000363817 110 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 SNORA67-201ENST00000384423 137 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL645733.1-201ENST00000402250 217 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 RNGTTP1-201ENST00000420965 728 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC093655.2-201ENST00000425735 631 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC005033.1-201ENST00000428904 813 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 VN1R54P-201ENST00000435210 1049 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 RPL12P18-201ENST00000437175 325 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 AURKAPS1-201ENST00000451805 1212 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 RPL7AP6-201ENST00000477943 801 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 RN7SL826P-201ENST00000479724 288 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 DUTP1-201ENST00000493631 470 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 NPM1P21-201ENST00000513394 762 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC126177.5-201ENST00000549599 178 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL022394.1-201ENST00000606979 292 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC025574.2-201ENST00000615621 514 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL162574.1-201ENST00000615702 950 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL078595.2-201ENST00000605309 1780 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 MT-RNR2-201ENST00000387347 1559 ntBASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TMX2-CTNND1H3BSU7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 RNA5SP305-201ENST00000362665 119 ntBASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 RN7SKP279-201ENST00000411383 298 ntBASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 RN7SKP273-201ENST00000411392 314 ntBASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 RPL35AP24-201ENST00000413846 330 ntBASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 FAR2P1-206ENST00000449736 709 ntBASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC093270.2-201ENST00000486157 792 ntBASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 SNRPCP2-201ENST00000504370 475 ntBASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 SCARNA16.4-201ENST00000516956 187 ntBASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 HMGB1P40-201ENST00000525121 540 ntBASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 PMS2P3-207ENST00000529061 717 ntBASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 AP000676.2-201ENST00000529711 301 ntBASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC084824.2-201ENST00000548906 345 ntBASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 BLZF2P-201ENST00000553776 1130 ntBASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 MIR4646-201ENST00000580775 63 ntBASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 AL513327.3-201ENST00000602618 469 ntBASIC5.32□□□□□ -1.56
TMX2-CTNND1H3BSU7 AC005229.3-201ENST00000603438 323 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms