Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 AC005225.5-201ENST00000623547 2225 ntBASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 AC012321.1-201ENST00000561622 1588 ntBASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 SNORD51.1-201ENST00000365405 77 ntBASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 TAS2R15P-201ENST00000390674 928 ntBASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 RN7SKP166-201ENST00000410812 305 ntBASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 AL024507.1-201ENST00000412741 274 ntBASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 RPS4XP5-201ENST00000419038 768 ntBASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 DEFA9P-201ENST00000433042 285 ntBASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 DNAJC19P5-201ENST00000443295 316 ntBASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 AC023141.9-201ENST00000458734 412 ntBASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 NENFP3-201ENST00000503735 313 ntBASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 HMGN2P36-201ENST00000529541 409 ntBASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 SNORD95-201ENST00000579879 68 ntBASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 NIFKP6-201ENST00000598115 845 ntBASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 AL683813.2-201ENST00000605245 502 ntBASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 AC004836.1-201ENST00000623032 634 ntBASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
CTDP1Q9Y5B0 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
CTDP1Q9Y5B0 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CTDP1Q9Y5B0 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.84□□□□□ -1.32
CTDP1Q9Y5B0 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
CTDP1Q9Y5B0 MTND5P23-201ENST00000430812 1655 ntBASIC6.84□□□□□ -1.32
CTDP1Q9Y5B0 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC007159.1-201ENST00000566529 4706 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC232271.1-201ENST00000602455 2715 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 RN7SKP151-201ENST00000410230 316 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 MYL6P5-201ENST00000412707 459 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 PTCD2P2-201ENST00000415579 1095 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 OR2X1P-201ENST00000421144 687 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC007562.1-201ENST00000421819 517 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 ELOCP11-201ENST00000436690 332 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 NANOGP9-201ENST00000439890 892 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 ELOCP16-201ENST00000444494 332 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC023274.2-201ENST00000445264 521 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 MTND2P6-201ENST00000455337 1030 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AL122001.1-201ENST00000457027 370 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC108157.1-201ENST00000510511 539 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 MTCO3P27-201ENST00000514397 196 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 SNORA76.2-201ENST00000517095 137 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC084824.2-201ENST00000548906 345 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 GARSP1-201ENST00000570895 719 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 MIR4260-201ENST00000583107 67 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC015802.2-201ENST00000589690 189 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 BNIP3P24-201ENST00000593398 557 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 Z99289.3-201ENST00000605586 594 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC145423.1-201ENST00000605712 336 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 FAM72A-208ENST00000607379 1139 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC006386.1-201ENST00000619436 415 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC095038.2-201ENST00000621464 1070 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC015660.5-201ENST00000623238 564 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC087565.3-203ENST00000641018 837 ntBASIC6.83□□□□□ -1.32
CTDP1Q9Y5B0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms