Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 PPATP2-201ENST00000605635 508 ntBASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 AL512329.2-201ENST00000607350 548 ntBASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 AC004948.1-201ENST00000609858 672 ntBASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 RNU6-883P-201ENST00000384597 107 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 RPL7L1P9-201ENST00000431298 745 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 CYCSP12-201ENST00000437729 300 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 VDAC2P4-201ENST00000452925 711 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 RN7SL51P-201ENST00000468230 285 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 AC004815.1-201ENST00000484185 331 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 HIGD1AP14-201ENST00000507617 282 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 RNU6-943P-201ENST00000516960 98 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 AC004825.1-201ENST00000555068 586 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 AC007423.1-201ENST00000605009 627 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 AL133481.2-203ENST00000607558 139 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 AC006213.4-201ENST00000616184 634 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 RNA5SP439-201ENST00000617595 124 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 AC080188.3-201ENST00000624842 748 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 SAMMSON-227ENST00000642114 1199 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 AP000473.2-201ENST00000602659 1537 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.3□□□□□ -1.4
HDAC6Q9UBN7 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AC012078.1-201ENST00000405035 1646 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AC020633.1-201ENST00000468439 2247 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 RNU6-386P-201ENST00000362650 107 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 RNU4-2-201ENST00000365668 141 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 RNU6-564P-201ENST00000410983 104 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 RPS6P23-201ENST00000413224 722 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 MTND2P40-201ENST00000436718 841 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AC096775.1-201ENST00000437724 448 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AC006335.2-201ENST00000437993 330 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 CNOT7P2-201ENST00000441051 832 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 RPL31P53-201ENST00000457065 348 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AC005532.2-201ENST00000467154 373 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AC105384.2-201ENST00000508433 640 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AC097486.1-201ENST00000515331 210 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms