Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 AC211433.2-201ENST00000608433 387 ntBASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 AC093388.1-201ENST00000609166 430 ntBASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 AL354950.1-201ENST00000614150 568 ntBASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLCF1Q9UBD9 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 OR55B1P-203ENST00000641518 2602 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AL078595.2-201ENST00000605309 1780 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 RNU1-19P-201ENST00000363306 165 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 SNORD56.6-201ENST00000384569 71 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 DBIP1-201ENST00000401435 260 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AL354868.1-201ENST00000417077 482 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AC093655.2-201ENST00000425735 631 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 RPS11P7-201ENST00000442125 465 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 EEF1B2P5-201ENST00000444820 548 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AC073072.2-201ENST00000447425 348 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 RPS23P9-201ENST00000448848 438 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AURKAPS1-201ENST00000451805 1212 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 OR10G5P-201ENST00000532733 358 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AP000769.2-201ENST00000602344 396 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AC069307.1-201ENST00000602820 447 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AC009237.13-201ENST00000603193 276 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AC015712.7-201ENST00000615211 635 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AC090527.3-201ENST00000619041 548 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AC006206.1-201ENST00000544842 3387 ntBASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCF1Q9UBD9 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 SAMM50P1-201ENST00000455403 1399 ntBASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AC090220.1-201ENST00000593078 1699 ntBASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AC011493.1-201ENST00000596753 1632 ntBASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AL050305.1-201ENST00000399993 1230 ntBASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 OR4K12P-201ENST00000406538 961 ntBASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 SNORA11B-201ENST00000408175 129 ntBASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AC092754.1-201ENST00000472975 479 ntBASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AC004815.1-201ENST00000484185 331 ntBASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AC015864.1-201ENST00000496512 544 ntBASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 RN7SL356P-201ENST00000582228 248 ntBASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 MIR4443-201ENST00000585052 53 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms