Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRFN1Q9P244 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC022884.3-201ENST00000579571 248 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC009237.12-201ENST00000604755 742 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC026979.4-201ENST00000606555 645 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC017076.1-201ENST00000607613 578 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC010608.3-201ENST00000625048 527 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC099654.9-201ENST00000637055 678 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.65□□□□□ -1.51
LRFN1Q9P244 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LRFN1Q9P244 RBMY1HP-201ENST00000382759 1389 ntBASIC5.65□□□□□ -1.51
LRFN1Q9P244 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LRFN1Q9P244 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LRFN1Q9P244 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRFN1Q9P244 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRFN1Q9P244 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRFN1Q9P244 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRFN1Q9P244 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRFN1Q9P244 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRFN1Q9P244 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 RNA5SP510-201ENST00000364697 99 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 SNORA72.3-201ENST00000365074 132 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 RN7SKP69-201ENST00000365390 305 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 MTCO3P21-201ENST00000430791 643 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 TRIM60P16-201ENST00000444048 694 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 FTLP8-201ENST00000446770 267 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 ACA64.1-201ENST00000459171 127 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 RPL17P2-201ENST00000491913 451 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 OR5H7P-201ENST00000514084 930 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 RNU6-415P-201ENST00000516252 97 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 AC060775.1-201ENST00000518241 520 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRFN1Q9P244 IGKV2D-10-201ENST00000520194 281 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRFN1Q9P244 RPA2P3-201ENST00000533268 770 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 NANOGNBP2-201ENST00000544753 553 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 MIR4420-201ENST00000583944 77 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 RN7SL622P-201ENST00000585292 275 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 AC090236.2-201ENST00000587933 1101 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 AC119501.1-201ENST00000603646 475 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 AC008555.7-201ENST00000605008 583 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 OR7A19P-201ENST00000608051 733 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 AC090912.3-201ENST00000609775 533 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 AC073342.3-201ENST00000624211 193 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 AP003497.2-201ENST00000624220 967 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 AP003485.1-201ENST00000625093 753 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 OR4G3P-201ENST00000633500 913 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 AC013437.2-201ENST00000639587 677 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRFN1Q9P244 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRFN1Q9P244 AL121839.2-201ENST00000565058 6943 ntBASIC5.64□□□□□ -1.51
LRFN1Q9P244 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRFN1Q9P244 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.64□□□□□ -1.51
LRFN1Q9P244 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRFN1Q9P244 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRFN1Q9P244 AC062029.1-202ENST00000606164 3651 ntBASIC5.63□□□□□ -1.51
LRFN1Q9P244 AL731556.1-201ENST00000394628 3711 ntBASIC5.63□□□□□ -1.51
LRFN1Q9P244 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LRFN1Q9P244 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LRFN1Q9P244 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.63□□□□□ -1.51
LRFN1Q9P244 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms