Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.89□□□□□ -1.31
PDLIM7Q9NR12 AC011416.1-201ENST00000514947 1732 ntBASIC6.89□□□□□ -1.31
PDLIM7Q9NR12 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDLIM7Q9NR12 AC119674.1-202ENST00000641333 1860 ntBASIC6.89□□□□□ -1.31
PDLIM7Q9NR12 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDLIM7Q9NR12 AC092692.1-201ENST00000623625 2595 ntBASIC6.89□□□□□ -1.31
PDLIM7Q9NR12 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDLIM7Q9NR12 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
PDLIM7Q9NR12 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PDLIM7Q9NR12 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PDLIM7Q9NR12 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
PDLIM7Q9NR12 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PDLIM7Q9NR12 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 RN7SKP160-201ENST00000363804 340 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 SNORA43.1-201ENST00000364863 140 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 RNU6-636P-201ENST00000384598 107 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 MIR433-201ENST00000384837 93 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 FABP12P1-201ENST00000401911 322 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AL627308.1-201ENST00000435693 821 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 ARL4AP3-201ENST00000441452 574 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AC118469.1-201ENST00000442943 488 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AC016772.1-201ENST00000444170 1261 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AC073387.1-201ENST00000453261 709 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 EIF3LP3-201ENST00000495197 822 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 HMGB1P3-201ENST00000502802 616 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AC011352.1-201ENST00000512300 793 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 Y_RNA.710-201ENST00000516975 110 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 IGLV2-28-201ENST00000520681 304 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AP000648.1-201ENST00000529682 397 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 RPA2P3-201ENST00000533268 770 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AC090888.1-201ENST00000561335 1141 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AC010547.6-201ENST00000571789 193 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AL589674.2-201ENST00000604304 337 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AC091193.1-201ENST00000604640 448 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 HIRAP1-201ENST00000605318 787 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AL031601.1-201ENST00000605702 394 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AC018445.2-201ENST00000622987 260 ntBASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PDLIM7Q9NR12 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.87□□□□□ -1.31
PDLIM7Q9NR12 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.87□□□□□ -1.31
PDLIM7Q9NR12 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
PDLIM7Q9NR12 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PDLIM7Q9NR12 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PDLIM7Q9NR12 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PDLIM7Q9NR12 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PDLIM7Q9NR12 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PDLIM7Q9NR12 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PDLIM7Q9NR12 AC104454.1-201ENST00000421341 1401 ntBASIC6.87□□□□□ -1.31
PDLIM7Q9NR12 MTND4P34-201ENST00000572715 1371 ntBASIC6.87□□□□□ -1.31
PDLIM7Q9NR12 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.87□□□□□ -1.31
PDLIM7Q9NR12 AC008432.1-201ENST00000615912 1320 ntBASIC6.87□□□□□ -1.31
PDLIM7Q9NR12 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.87□□□□□ -1.31
PDLIM7Q9NR12 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms