Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SUMO2P5-201ENST00000506790 245 ntBASIC6.67□□□□□ -1.34
VTA1Q9NP79 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.67□□□□□ -1.34
VTA1Q9NP79 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.67□□□□□ -1.34
VTA1Q9NP79 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.67□□□□□ -1.34
VTA1Q9NP79 Y_RNA.717-201ENST00000517106 92 ntBASIC6.67□□□□□ -1.34
VTA1Q9NP79 AC027308.1-201ENST00000517993 110 ntBASIC6.67□□□□□ -1.34
VTA1Q9NP79 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
VTA1Q9NP79 NPM1P35-201ENST00000533043 868 ntBASIC6.67□□□□□ -1.34
VTA1Q9NP79 IGBP1P1-201ENST00000554337 1009 ntBASIC6.67□□□□□ -1.34
VTA1Q9NP79 AC093524.1-201ENST00000564266 1094 ntBASIC6.67□□□□□ -1.34
VTA1Q9NP79 MTCO2P2-201ENST00000591258 225 ntBASIC6.67□□□□□ -1.34
VTA1Q9NP79 AL683813.2-201ENST00000605245 502 ntBASIC6.67□□□□□ -1.34
VTA1Q9NP79 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
VTA1Q9NP79 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VTA1Q9NP79 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.67□□□□□ -1.34
VTA1Q9NP79 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.67□□□□□ -1.34
VTA1Q9NP79 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
VTA1Q9NP79 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
VTA1Q9NP79 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
VTA1Q9NP79 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
VTA1Q9NP79 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VTA1Q9NP79 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.67□□□□□ -1.34
VTA1Q9NP79 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
VTA1Q9NP79 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VTA1Q9NP79 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 AC012078.1-201ENST00000405035 1646 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VTA1Q9NP79 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
VTA1Q9NP79 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VTA1Q9NP79 RN7SKP160-201ENST00000363804 340 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VTA1Q9NP79 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VTA1Q9NP79 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VTA1Q9NP79 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 AL158825.1-201ENST00000414735 521 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 BMS1P13-201ENST00000417301 885 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 ZNF736P7Y-201ENST00000425158 820 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 AL022331.1-201ENST00000429025 477 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 ELOCP11-201ENST00000436690 332 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 MTCYBP12-201ENST00000440559 1134 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 SNRPFP2-201ENST00000440710 251 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 ELOCP16-201ENST00000444494 332 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 AL031313.1-201ENST00000448435 256 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 RSU1P1-201ENST00000453416 441 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 AC002075.1-201ENST00000457396 676 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 AC110749.1-201ENST00000462007 357 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 RPS23P6-201ENST00000466136 431 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 AC022215.1-201ENST00000481770 362 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 OR11I1P-201ENST00000486033 954 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 AC109481.1-201ENST00000509173 282 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 RN7SKP265-201ENST00000516448 223 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 OR8G5-201ENST00000524943 1041 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 AC068020.1-201ENST00000594215 661 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 AC130352.1-201ENST00000602979 661 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 RNU6-84P-201ENST00000607737 102 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 AC245100.7-201ENST00000609678 442 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 uc_338.26-201ENST00000612659 160 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VTA1Q9NP79 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VTA1Q9NP79 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
VTA1Q9NP79 AC123769.1-201ENST00000530992 3192 ntBASIC6.66□□□□□ -1.34
VTA1Q9NP79 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VTA1Q9NP79 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VTA1Q9NP79 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VTA1Q9NP79 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VTA1Q9NP79 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
VTA1Q9NP79 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VTA1Q9NP79 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VTA1Q9NP79 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VTA1Q9NP79 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VTA1Q9NP79 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 AC092724.1-201ENST00000624623 3397 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms