Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC112230.1-201ENST00000604342 547 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC069545.1-201ENST00000605671 358 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC068276.1-201ENST00000605793 379 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC099676.1-201ENST00000608886 657 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC079395.2-201ENST00000610982 737 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC023158.2-201ENST00000614876 543 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC087894.3-201ENST00000623682 349 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSU72Q9NP77 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSU72Q9NP77 HSPD1P8-201ENST00000400121 1658 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSU72Q9NP77 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSU72Q9NP77 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSU72Q9NP77 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSU72Q9NP77 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSU72Q9NP77 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSU72Q9NP77 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSU72Q9NP77 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSU72Q9NP77 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 METTL21EP-201ENST00000298105 713 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 Y_RNA.70-201ENST00000362886 110 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 RN7SKP55-201ENST00000364888 307 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 RNA5SP442-201ENST00000365050 107 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSU72Q9NP77 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 RNU6-259P-201ENST00000383999 107 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 MIR142-201ENST00000384835 87 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 FAUP2-201ENST00000394301 401 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 HIST1H2BPS2-201ENST00000402707 340 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 RNU6-575P-201ENST00000411326 105 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC116036.1-201ENST00000412199 367 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC007435.1-201ENST00000421086 415 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 Z68868.1-201ENST00000429048 544 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 USP9YP31-201ENST00000431405 881 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 MYL6P3-201ENST00000436904 432 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 NANOGNBP1-201ENST00000448444 480 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 AL354714.5-201ENST00000450131 590 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 GAPDHP53-201ENST00000458397 924 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 RNA5SP269-201ENST00000459032 137 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 RPL31P58-201ENST00000469001 379 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC009108.1-201ENST00000473913 796 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 RN7SL165P-201ENST00000477476 291 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC106774.2-201ENST00000510266 406 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC117383.2-201ENST00000514722 322 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AP001803.1-201ENST00000525668 147 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 ANP32BP3-201ENST00000559213 706 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC026458.1-201ENST00000564330 438 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC068020.1-201ENST00000594215 661 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC130352.1-201ENST00000602979 661 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 RNU4-89P-201ENST00000607443 133 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC007014.2-201ENST00000615581 479 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 MIR7844-201ENST00000616161 122 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 AL136981.2-201ENST00000617319 734 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 PART1_3.1-201ENST00000619680 131 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC099654.14-201ENST00000638599 341 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 AC099063.3-201ENST00000642066 185 ntBASIC6.69□□□□□ -1.34
SSU72Q9NP77 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SSU72Q9NP77 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms