Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 AL627230.1-201ENST00000613077 211 ntBASIC4.99□□□□□ -1.61
CHD8Q9HCK8 AL591926.8-201ENST00000616876 211 ntBASIC4.99□□□□□ -1.61
CHD8Q9HCK8 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.98□□□□□ -1.61
CHD8Q9HCK8 AC099654.2-201ENST00000433031 1980 ntBASIC4.98□□□□□ -1.61
CHD8Q9HCK8 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 AL359922.2-201ENST00000581788 3017 ntBASIC4.98□□□□□ -1.61
CHD8Q9HCK8 RN7SKP95-201ENST00000362860 303 ntBASIC4.98□□□□□ -1.61
CHD8Q9HCK8 SNORA70F-201ENST00000384142 135 ntBASIC4.98□□□□□ -1.61
CHD8Q9HCK8 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.98□□□□□ -1.61
CHD8Q9HCK8 RN7SKP151-201ENST00000410230 316 ntBASIC4.98□□□□□ -1.61
CHD8Q9HCK8 AL358176.3-201ENST00000420757 454 ntBASIC4.98□□□□□ -1.61
CHD8Q9HCK8 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 AC079168.2-201ENST00000453977 416 ntBASIC4.98□□□□□ -1.61
CHD8Q9HCK8 AC022133.1-201ENST00000490961 571 ntBASIC4.98□□□□□ -1.61
CHD8Q9HCK8 AC140172.1-201ENST00000502928 141 ntBASIC4.98□□□□□ -1.61
CHD8Q9HCK8 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 OR5D2P-201ENST00000524390 911 ntBASIC4.98□□□□□ -1.61
CHD8Q9HCK8 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 AC116312.1-201ENST00000606841 314 ntBASIC4.98□□□□□ -1.61
CHD8Q9HCK8 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.98□□□□□ -1.61
CHD8Q9HCK8 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 AL137100.1-201ENST00000556703 1620 ntBASIC4.98□□□□□ -1.61
CHD8Q9HCK8 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 AC091564.1-201ENST00000464563 479 ntBASIC4.98□□□□□ -1.61
CHD8Q9HCK8 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 MIR3200-201ENST00000580767 85 ntBASIC4.98□□□□□ -1.61
CHD8Q9HCK8 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CHD8Q9HCK8 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 DBIP1-201ENST00000401435 260 ntBASIC4.97□□□□□ -1.61
CHD8Q9HCK8 MIR1182-201ENST00000408363 97 ntBASIC4.97□□□□□ -1.61
CHD8Q9HCK8 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 AC112498.1-201ENST00000444401 332 ntBASIC4.97□□□□□ -1.61
CHD8Q9HCK8 RN7SL352P-201ENST00000466002 277 ntBASIC4.97□□□□□ -1.61
CHD8Q9HCK8 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 RNU1-103P-201ENST00000516502 125 ntBASIC4.97□□□□□ -1.61
CHD8Q9HCK8 OR5AM1P-201ENST00000532136 1032 ntBASIC4.97□□□□□ -1.61
CHD8Q9HCK8 MIR4513-201ENST00000581077 86 ntBASIC4.97□□□□□ -1.61
CHD8Q9HCK8 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 XIST-206ENST00000434839 2865 ntTSL 5 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.97□□□□□ -1.61
CHD8Q9HCK8 IGKV1OR22-5-201ENST00000458718 354 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms