Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AP006222.1-205ENST00000450734 457 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AP002345.1-201ENST00000456493 928 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 RPS27AP2-201ENST00000457576 465 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 OR5D2P-201ENST00000524390 911 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AC092868.3-201ENST00000560515 784 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AC068880.4-201ENST00000623082 495 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 MTCO1P4-201ENST00000520516 1409 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 Z95114.1-201ENST00000624264 14574 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AC009962.1-201ENST00000567327 3813 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 GTF2IP4-201ENST00000453092 2054 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AC005261.2-201ENST00000593427 4258 ntBASIC5.96□□□□□ -1.45
USP29Q9HBJ7 OR13C1P-202ENST00000641378 2919 ntBASIC5.96□□□□□ -1.45
USP29Q9HBJ7 AC004076.2-201ENST00000620532 3323 ntBASIC5.96□□□□□ -1.45
USP29Q9HBJ7 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
USP29Q9HBJ7 AC009501.3-201ENST00000605001 1352 ntBASIC5.96□□□□□ -1.45
USP29Q9HBJ7 AC005261.6-201ENST00000623072 1387 ntBASIC5.96□□□□□ -1.45
USP29Q9HBJ7 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.96□□□□□ -1.45
USP29Q9HBJ7 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
USP29Q9HBJ7 AP004607.3-201ENST00000530354 3915 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 RNU6-650P-201ENST00000365658 111 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 Z68694.1-201ENST00000413929 841 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AC092570.3-201ENST00000420113 693 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 MTATP6P17-201ENST00000431030 672 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AC011242.1-201ENST00000433596 1158 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 HMGN1P36-201ENST00000446623 298 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 GTF2IP9-201ENST00000502460 301 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 TRAV31-201ENST00000502780 342 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 RPEP1-201ENST00000504507 658 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 CD24P2-201ENST00000565486 219 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AC006116.5-201ENST00000591936 559 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AC125494.2-201ENST00000602431 657 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AL139099.4-201ENST00000614802 114 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AC245389.2-201ENST00000616023 576 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AC242843.1-201ENST00000618702 573 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AF287957.1-201ENST00000607368 1595 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 AC091305.2-201ENST00000624049 1576 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
USP29Q9HBJ7 PARP4P2-201ENST00000446672 3326 ntBASIC5.96□□□□□ -1.46
USP29Q9HBJ7 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.95□□□□□ -1.46
USP29Q9HBJ7 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.95□□□□□ -1.46
USP29Q9HBJ7 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.95□□□□□ -1.46
USP29Q9HBJ7 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
USP29Q9HBJ7 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP29Q9HBJ7 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
USP29Q9HBJ7 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.95□□□□□ -1.46
USP29Q9HBJ7 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP29Q9HBJ7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP29Q9HBJ7 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USP29Q9HBJ7 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms