Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RPS7P6-201ENST00000485777 579 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 RN7SL284P-201ENST00000498823 275 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 GAPDHP62-201ENST00000515313 990 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 HMGN2P36-201ENST00000529541 409 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AP000648.1-201ENST00000529682 397 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AC068305.2-201ENST00000550567 1205 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AC005776.1-201ENST00000603164 290 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AL031601.1-201ENST00000605702 394 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AC120053.1-201ENST00000607706 736 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AC110792.4-201ENST00000609843 298 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AC244100.4-201ENST00000617747 388 ntBASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.52□□□□□ -1.53
BRF2Q9HAW0 NXF4-202ENST00000416098 1465 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 RNA5SP500-201ENST00000364486 119 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 RNA5SP431-201ENST00000410312 120 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 RNU4-74P-201ENST00000411280 161 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 RNA5SP498-201ENST00000411342 120 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 AL354868.1-201ENST00000417077 482 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 AL133244.1-201ENST00000456007 258 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 PSMC1P13-201ENST00000458195 985 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 SNORD125-201ENST00000459538 96 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 AC104339.1-201ENST00000465478 348 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 RN7SL570P-201ENST00000484405 292 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 OR4A17P-201ENST00000526032 904 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 AC079905.1-201ENST00000549280 475 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 AC096996.1-201ENST00000563813 325 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 AC015911.5-201ENST00000587076 451 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 AL049844.2-201ENST00000604280 628 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 MIR6889-201ENST00000613185 59 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 AC024884.1-201ENST00000620583 399 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 AC006840.1-201ENST00000623069 542 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 AC114774.1-201ENST00000507410 1770 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.51□□□□□ -1.53
BRF2Q9HAW0 TCP1P3-201ENST00000414406 1498 ntBASIC5.51□□□□□ -1.53
BRF2Q9HAW0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.5□□□□□ -1.53
BRF2Q9HAW0 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRF2Q9HAW0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRF2Q9HAW0 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
BRF2Q9HAW0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BRF2Q9HAW0 AC097063.1-201ENST00000426714 1797 ntBASIC5.5□□□□□ -1.53
BRF2Q9HAW0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BRF2Q9HAW0 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BRF2Q9HAW0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.5□□□□□ -1.53
BRF2Q9HAW0 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRF2Q9HAW0 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
BRF2Q9HAW0 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.5□□□□□ -1.53
BRF2Q9HAW0 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
BRF2Q9HAW0 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.5□□□□□ -1.53
BRF2Q9HAW0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
BRF2Q9HAW0 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
BRF2Q9HAW0 RNU1-65P-201ENST00000363919 148 ntBASIC5.5□□□□□ -1.53
BRF2Q9HAW0 MIR130A-201ENST00000385274 89 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms