Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RNU6-525P-201ENST00000363685 104 ntBASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 SNORA70C-201ENST00000384538 135 ntBASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 MIR105-1-201ENST00000385222 81 ntBASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 AC096921.1-201ENST00000411661 375 ntBASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 AL732292.1-201ENST00000426692 226 ntBASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 RPS29P10-201ENST00000439197 166 ntBASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 SCARNA10-201ENST00000459255 330 ntBASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 SNORA74D-201ENST00000516404 141 ntBASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 AF186996.5-201ENST00000418098 904 ntBASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 AC010326.1-201ENST00000462726 602 ntBASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 AC114755.5-201ENST00000447760 831 ntBASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 RPS7P6-201ENST00000485777 579 ntBASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 PCAT14-202ENST00000627127 3935 ntBASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 MIR600-201ENST00000385007 98 ntBASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 MIR298-201ENST00000401212 88 ntBASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 AP002530.1-201ENST00000405705 684 ntBASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CSMD1Q96PZ7 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 AC010733.1-201ENST00000451515 401 ntBASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 AC006115.2-201ENST00000596823 202 ntBASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 GABRB3-204ENST00000541819 5934 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 NAIP-201ENST00000194097 6088 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 TNFRSF9-204ENST00000615230 5970 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 AC245060.6-201ENST00000624350 8420 ntBASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 AGGF1P7-201ENST00000562369 913 ntBASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 MIR4301-201ENST00000577203 66 ntBASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 AC017100.2-201ENST00000584628 355 ntBASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 AC098935.2-201ENST00000604222 466 ntBASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CSMD1Q96PZ7 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms