Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC114781.3-201ENST00000512083 142 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC004923.2-201ENST00000529649 369 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC068620.3-201ENST00000602749 560 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC004477.3-201ENST00000614061 590 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 MIR8084-201ENST00000614105 89 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC008147.4-201ENST00000617570 1204 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC015660.5-201ENST00000623238 564 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 AL138820.1-201ENST00000617901 5305 ntBASIC6.52□□□□□ -1.37
CDK5RAP3Q96JB5 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 GVINP1-202ENST00000531871 7271 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 GSTA12P-201ENST00000402398 508 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 RN7SKP240-201ENST00000410583 375 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AC073310.1-201ENST00000423226 1033 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AC046176.1-201ENST00000435260 1170 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 PCBP2P1-201ENST00000437262 977 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 OR7E116P-201ENST00000448529 957 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 snoU13.29-201ENST00000459370 104 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AC093719.1-201ENST00000480427 441 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AC034244.2-201ENST00000514668 858 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 SOX5P1-201ENST00000524155 1127 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AC092121.1-201ENST00000569452 202 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 SNORD39.2-201ENST00000579995 76 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AC134669.1-201ENST00000581275 672 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AL451049.1-201ENST00000608672 497 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AL050303.3-201ENST00000613704 284 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AC090506.2-201ENST00000624521 419 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AP003485.1-201ENST00000625093 753 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 AL034546.1-201ENST00000623740 3693 ntBASIC6.51□□□□□ -1.37
CDK5RAP3Q96JB5 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 MFSD8-239ENST00000641590 2479 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 AC010132.2-201ENST00000295493 1043 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 MIR137-201ENST00000385223 102 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 RPL10P10-201ENST00000403509 664 ntBASIC6.5□□□□□ -1.37
CDK5RAP3Q96JB5 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms