Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC1.66□□□□□ -2.14
SYNE1Q8NF91 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 RN7SL352P-201ENST00000466002 277 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AC128716.1-201ENST00000475129 166 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 RN7SL591P-201ENST00000496150 292 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 SNRPCP2-201ENST00000504370 475 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AP005432.2-201ENST00000608162 586 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AC015660.5-201ENST00000623238 564 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 MTCO1P1-201ENST00000624263 1081 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 SAMMSON-209ENST00000641222 1100 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AC023141.8-201ENST00000442554 208 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 RPL12P39-201ENST00000455456 496 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 RPL17P2-201ENST00000491913 451 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 MIR1254-2-201ENST00000579553 63 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AP001357.1-201ENST00000586304 1053 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AL683813.2-201ENST00000605245 502 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AL109618.2-201ENST00000605527 211 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AC132068.1-201ENST00000623805 459 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 CEACAMP7-201ENST00000444105 496 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 BX510359.5-201ENST00000515651 304 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 UBE2FP2-201ENST00000566646 462 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 BNIP3P33-201ENST00000598912 569 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AL139099.4-201ENST00000614802 114 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 AC083809.1-201ENST00000615051 472 ntBASIC1.65□□□□□ -2.14
SYNE1Q8NF91 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
SYNE1Q8NF91 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 FAM3C2-201ENST00000312214 681 ntBASIC1.65□□□□□ -2.15
SYNE1Q8NF91 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 RNA5SP91-201ENST00000390902 119 ntBASIC1.65□□□□□ -2.15
SYNE1Q8NF91 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 AC092324.1-201ENST00000468671 324 ntBASIC1.65□□□□□ -2.15
SYNE1Q8NF91 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 FAM32BP-201ENST00000344033 333 ntBASIC1.65□□□□□ -2.15
SYNE1Q8NF91 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 PA2G4P6-201ENST00000438325 1197 ntBASIC1.65□□□□□ -2.15
SYNE1Q8NF91 RPL34P20-201ENST00000442771 351 ntBASIC1.65□□□□□ -2.15
SYNE1Q8NF91 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC1.65□□□□□ -2.15
SYNE1Q8NF91 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms