Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 PRUNEP1-201ENST00000425846 705 ntBASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 NAP1L4P2-201ENST00000425958 899 ntBASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 RPL7AP49-201ENST00000429522 581 ntBASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 AL591438.1-201ENST00000433508 581 ntBASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 AC016772.1-201ENST00000444170 1261 ntBASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 EIF1P7-201ENST00000487533 337 ntBASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 AP004607.2-201ENST00000533949 322 ntBASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 AP003400.3-201ENST00000624904 346 ntBASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 BRAFP1-201ENST00000445336 2703 ntBASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 AC079298.1-201ENST00000625026 1619 ntBASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC65Q8IXS2 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 MTCO1P46-201ENST00000451639 1491 ntBASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 RNU1-19P-201ENST00000363306 165 ntBASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 RNA5SP187-201ENST00000384400 119 ntBASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 AL133388.1-201ENST00000404509 287 ntBASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 RNA5SP296-201ENST00000410523 111 ntBASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 GAPDHP25-201ENST00000447061 1001 ntBASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 AL035090.1-201ENST00000454835 332 ntBASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 RPL35AP19-201ENST00000469425 329 ntBASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 RN7SL717P-201ENST00000478343 297 ntBASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 BLZF2P-201ENST00000553776 1130 ntBASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 AC020978.7-201ENST00000575953 1187 ntBASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 MIR8080-201ENST00000622224 89 ntBASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 KARSP1-201ENST00000451871 1752 ntBASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CCDC65Q8IXS2 PCAT14-202ENST00000627127 3935 ntBASIC5.96□□□□□ -1.45
CCDC65Q8IXS2 ADAM24P-201ENST00000398655 2101 ntBASIC5.96□□□□□ -1.45
CCDC65Q8IXS2 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.45
CCDC65Q8IXS2 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.96□□□□□ -1.45
CCDC65Q8IXS2 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 MIR133B-201ENST00000362210 119 ntBASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 RNA5SP241-201ENST00000391326 114 ntBASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 RPSAP39-201ENST00000467439 883 ntBASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 RPS24P16-201ENST00000497294 392 ntBASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 RNU6-84P-201ENST00000607737 102 ntBASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 AL078621.3-201ENST00000623707 2042 ntBASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CCDC65Q8IXS2 AP001029.2-203ENST00000589795 4910 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 SNORA48.4-201ENST00000391089 134 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 HSPA8P15-201ENST00000401676 786 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 RNA5SP487-201ENST00000410186 122 ntBASIC5.95□□□□□ -1.46
CCDC65Q8IXS2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms