Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AC087501.5-201ENST00000607496 2374 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 Y_RNA.311-201ENST00000365068 96 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 RNA5SP77-201ENST00000365394 120 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 MTND4LP20-201ENST00000402379 270 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AL450992.3-201ENST00000413192 568 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 VN1R20P-201ENST00000425215 966 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 BLOC1S2P1-201ENST00000428431 301 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 GAPDHP59-201ENST00000435908 267 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 RPS7P5-201ENST00000441482 581 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 RPL12P26-201ENST00000452430 487 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AC069304.1-201ENST00000491593 704 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AL035404.1-201ENST00000497982 568 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 TCP11X3P-202ENST00000514289 1254 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 HSD3BP3-201ENST00000514706 994 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AC022880.1-201ENST00000534017 973 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AL845552.1-201ENST00000556820 323 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 RN7SL199P-201ENST00000578752 281 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 RN7SL656P-201ENST00000579044 281 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 RN7SL270P-201ENST00000579643 281 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AC010463.3-201ENST00000594077 500 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AP002345.2-201ENST00000609961 904 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AC016717.3-201ENST00000624730 554 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AL392088.2-201ENST00000637607 285 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AC005614.1-201ENST00000598952 3653 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AL390237.1-201ENST00000404226 1415 ntBASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NPAS4Q8IUM7 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 PROS2P-201ENST00000474651 1951 ntBASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 RNF6P1-201ENST00000444889 1784 ntBASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 AL391994.1-201ENST00000254724 282 ntBASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 RNU1-84P-201ENST00000365447 164 ntBASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 MRPS6P2-201ENST00000381143 370 ntBASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NPAS4Q8IUM7 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms