Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTPN20Q4JDL3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 AC012078.1-201ENST00000405035 1646 ntBASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 NPM1P4-201ENST00000414095 812 ntBASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 AC079355.1-201ENST00000421770 223 ntBASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 FAM96AP1-201ENST00000430879 482 ntBASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 CLUHP1-201ENST00000435012 1190 ntBASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 EIF3LP3-201ENST00000495197 822 ntBASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 AC015864.1-201ENST00000496512 544 ntBASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 PGAM1P13-201ENST00000507497 754 ntBASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 ATP5LP3-201ENST00000514223 304 ntBASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 LDHBP3-201ENST00000514909 822 ntBASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 MTCYBP13-201ENST00000578634 1093 ntBASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 AC069307.1-201ENST00000602820 447 ntBASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 MIR4302-201ENST00000638058 60 ntBASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
PTPN20Q4JDL3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 AC023421.1-201ENST00000590535 1785 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 AC005294.1-201ENST00000355509 281 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 RN7SKP153-201ENST00000365026 316 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 AC009506.2-201ENST00000420635 840 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 AC108075.1-201ENST00000424692 529 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 PPIAP20-201ENST00000449839 135 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 CBX1P2-201ENST00000453841 458 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 DNAJB5P1-201ENST00000454004 806 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 RPS4XP1-201ENST00000482189 787 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 AC022133.1-201ENST00000490961 571 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 AC021733.2-201ENST00000518830 497 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 AC127381.1-201ENST00000555979 939 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 RN7SL708P-201ENST00000580952 299 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 AC009597.2-201ENST00000604659 592 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 CASC19-264ENST00000641912 1184 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 AC092747.4-201ENST00000620519 1861 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.55□□□□□ -1.52
PTPN20Q4JDL3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 U3.3-201ENST00000362986 216 ntBASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 SNORA5.1-201ENST00000384275 131 ntBASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 AL391361.1-201ENST00000405580 489 ntBASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 RPL12P9-201ENST00000412942 488 ntBASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 RPS11P7-201ENST00000442125 465 ntBASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 AC090589.1-201ENST00000473109 362 ntBASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 RPL7P40-201ENST00000481703 745 ntBASIC5.54□□□□□ -1.52
PTPN20Q4JDL3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 242.5 ms