Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.3□□□□□ -1.56
LTBQ06643 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.3□□□□□ -1.56
LTBQ06643 CU459211.1-201ENST00000635667 749 ntBASIC5.3□□□□□ -1.56
LTBQ06643 AC119674.1-220ENST00000641502 1048 ntBASIC5.3□□□□□ -1.56
LTBQ06643 OR11H2-202ENST00000641517 1085 ntBASIC5.3□□□□□ -1.56
LTBQ06643 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LTBQ06643 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LTBQ06643 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LTBQ06643 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LTBQ06643 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LTBQ06643 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.3□□□□□ -1.56
LTBQ06643 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.3□□□□□ -1.56
LTBQ06643 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LTBQ06643 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LTBQ06643 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
LTBQ06643 MFSD8-239ENST00000641590 2479 ntBASIC5.3□□□□□ -1.56
LTBQ06643 AL355488.2-201ENST00000609909 2850 ntBASIC5.3□□□□□ -1.56
LTBQ06643 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LTBQ06643 AF287957.1-201ENST00000607368 1595 ntBASIC5.29□□□□□ -1.56
LTBQ06643 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.29□□□□□ -1.56
LTBQ06643 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LTBQ06643 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.29□□□□□ -1.56
LTBQ06643 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
LTBQ06643 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LTBQ06643 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LTBQ06643 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LTBQ06643 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LTBQ06643 GAPDHP24-201ENST00000328713 983 ntBASIC5.29□□□□□ -1.56
LTBQ06643 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LTBQ06643 RN7SKP115-201ENST00000363177 317 ntBASIC5.29□□□□□ -1.56
LTBQ06643 RN7SKP160-201ENST00000363804 340 ntBASIC5.29□□□□□ -1.56
LTBQ06643 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.29□□□□□ -1.56
LTBQ06643 AL356057.1-202ENST00000402263 756 ntBASIC5.29□□□□□ -1.56
LTBQ06643 RNU4-34P-201ENST00000410431 124 ntBASIC5.29□□□□□ -1.56
LTBQ06643 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.29□□□□□ -1.56
LTBQ06643 HMGB3P5-201ENST00000428894 612 ntBASIC5.29□□□□□ -1.56
LTBQ06643 DEFA9P-201ENST00000433042 285 ntBASIC5.29□□□□□ -1.56
LTBQ06643 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.29□□□□□ -1.56
LTBQ06643 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.29□□□□□ -1.56
LTBQ06643 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.29□□□□□ -1.56
LTBQ06643 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LTBQ06643 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.29□□□□□ -1.56
LTBQ06643 AP000281.1-201ENST00000444036 316 ntBASIC5.29□□□□□ -1.56
LTBQ06643 MTATP6P26-201ENST00000445926 662 ntBASIC5.29□□□□□ -1.56
LTBQ06643 AP006222.1-205ENST00000450734 457 ntBASIC5.29□□□□□ -1.56
LTBQ06643 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.29□□□□□ -1.56
LTBQ06643 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.29□□□□□ -1.56
LTBQ06643 C1DP3-201ENST00000455013 423 ntBASIC5.29□□□□□ -1.56
LTBQ06643 RPL12P39-201ENST00000455456 496 ntBASIC5.29□□□□□ -1.56
LTBQ06643 AC004129.2-201ENST00000457229 287 ntBASIC5.29□□□□□ -1.56
LTBQ06643 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.29□□□□□ -1.56
LTBQ06643 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.29□□□□□ -1.56
LTBQ06643 AC021146.10-201ENST00000515628 706 ntBASIC5.29□□□□□ -1.56
LTBQ06643 RNA5SP438-201ENST00000516561 112 ntBASIC5.29□□□□□ -1.56
LTBQ06643 MTND2P38-201ENST00000522536 667 ntBASIC5.29□□□□□ -1.56
LTBQ06643 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.29□□□□□ -1.56
LTBQ06643 AC139103.1-201ENST00000534696 1030 ntBASIC5.29□□□□□ -1.56
LTBQ06643 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.29□□□□□ -1.56
LTBQ06643 AC091078.2-201ENST00000557145 559 ntBASIC5.29□□□□□ -1.56
LTBQ06643 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.29□□□□□ -1.56
LTBQ06643 AC027176.2-201ENST00000559166 746 ntBASIC5.29□□□□□ -1.56
LTBQ06643 AC093510.2-201ENST00000562820 896 ntBASIC5.29□□□□□ -1.56
LTBQ06643 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.29□□□□□ -1.56
LTBQ06643 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.29□□□□□ -1.56
LTBQ06643 AC135178.6-201ENST00000605314 398 ntBASIC5.29□□□□□ -1.56
LTBQ06643 AL450270.1-201ENST00000606160 391 ntBASIC5.29□□□□□ -1.56
LTBQ06643 AL133481.2-203ENST00000607558 139 ntBASIC5.29□□□□□ -1.56
LTBQ06643 AC108673.3-201ENST00000609183 335 ntBASIC5.29□□□□□ -1.56
LTBQ06643 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.29□□□□□ -1.56
LTBQ06643 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.29□□□□□ -1.56
LTBQ06643 AC004808.1-201ENST00000627671 721 ntBASIC5.29□□□□□ -1.56
LTBQ06643 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LTBQ06643 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LTBQ06643 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
LTBQ06643 MFSD8-219ENST00000641228 2559 ntBASIC5.29□□□□□ -1.56
LTBQ06643 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LTBQ06643 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LTBQ06643 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.29□□□□□ -1.56
LTBQ06643 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LTBQ06643 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
LTBQ06643 OFD1P17-201ENST00000437639 3018 ntBASIC5.29□□□□□ -1.56
LTBQ06643 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LTBQ06643 MTCO1P15-201ENST00000529569 1526 ntBASIC5.28□□□□□ -1.56
LTBQ06643 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
LTBQ06643 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
LTBQ06643 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LTBQ06643 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LTBQ06643 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
LTBQ06643 AC117409.1-201ENST00000470499 1310 ntBASIC5.28□□□□□ -1.56
LTBQ06643 CASC19-260ENST00000641828 2001 ntBASIC5.28□□□□□ -1.56
LTBQ06643 AL592429.1-201ENST00000403909 1473 ntBASIC5.28□□□□□ -1.56
LTBQ06643 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
LTBQ06643 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LTBQ06643 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LTBQ06643 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.28□□□□□ -1.56
LTBQ06643 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.28□□□□□ -1.56
LTBQ06643 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LTBQ06643 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LTBQ06643 U3.7-201ENST00000363668 216 ntBASIC5.28□□□□□ -1.56
LTBQ06643 U3.10-201ENST00000364459 214 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms