Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.44□□□□□ -1.54
CDK3Q00526 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.44□□□□□ -1.54
CDK3Q00526 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDK3Q00526 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CDK3Q00526 RNU1-77P-201ENST00000390868 162 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 AMZ2P2-201ENST00000406819 1057 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDK3Q00526 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDK3Q00526 ZFAND6P1-201ENST00000434138 605 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.44□□□□□ -1.54
CDK3Q00526 AC105399.1-202ENST00000447303 205 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 SNORD125-201ENST00000459538 96 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 COPS8P2-201ENST00000473228 627 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 RPS4XP14-201ENST00000493072 781 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 RPL37AP8-201ENST00000494116 276 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 PCNAP1-201ENST00000505363 709 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDK3Q00526 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK3Q00526 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.44□□□□□ -1.54
CDK3Q00526 IGKV2-19-201ENST00000518132 283 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDK3Q00526 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.44□□□□□ -1.54
CDK3Q00526 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.44□□□□□ -1.54
CDK3Q00526 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK3Q00526 AC008147.3-201ENST00000548666 354 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK3Q00526 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK3Q00526 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.44□□□□□ -1.54
CDK3Q00526 SUMO2P15-201ENST00000604285 278 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 HMGB1P51-201ENST00000605166 638 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 AC012213.4-201ENST00000606457 354 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 AC005899.7-201ENST00000618199 588 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 MIR6837-201ENST00000620884 64 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 LINC00216-201ENST00000623548 1126 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 AC112255.1-201ENST00000624070 2493 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 SAMMSON-209ENST00000641222 1100 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.44□□□□□ -1.54
CDK3Q00526 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDK3Q00526 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDK3Q00526 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CDK3Q00526 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDK3Q00526 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK3Q00526 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK3Q00526 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK3Q00526 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDK3Q00526 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK3Q00526 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK3Q00526 DDX18P6-201ENST00000450119 1997 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDK3Q00526 CR788268.1-201ENST00000603931 1809 ntBASIC5.44□□□□□ -1.54
CDK3Q00526 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDK3Q00526 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CDK3Q00526 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.43□□□□□ -1.54
CDK3Q00526 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.43□□□□□ -1.54
CDK3Q00526 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDK3Q00526 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDK3Q00526 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDK3Q00526 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDK3Q00526 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CDK3Q00526 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDK3Q00526 RNA5SP335-201ENST00000363817 110 ntBASIC5.43□□□□□ -1.54
CDK3Q00526 U3.10-201ENST00000364459 214 ntBASIC5.43□□□□□ -1.54
CDK3Q00526 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CDK3Q00526 Z68694.1-201ENST00000413929 841 ntBASIC5.43□□□□□ -1.54
CDK3Q00526 BX510359.3-201ENST00000422168 306 ntBASIC5.43□□□□□ -1.54
CDK3Q00526 RIMKLBP2-201ENST00000424737 654 ntBASIC5.43□□□□□ -1.54
CDK3Q00526 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.43□□□□□ -1.54
CDK3Q00526 RNF19BPX-201ENST00000426224 625 ntBASIC5.43□□□□□ -1.54
CDK3Q00526 CYCSP6-201ENST00000434498 302 ntBASIC5.43□□□□□ -1.54
CDK3Q00526 ARL5AP3-201ENST00000439327 386 ntBASIC5.43□□□□□ -1.54
CDK3Q00526 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK3Q00526 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.43□□□□□ -1.54
CDK3Q00526 OR2AO1P-201ENST00000476497 403 ntBASIC5.43□□□□□ -1.54
CDK3Q00526 UBA52P7-201ENST00000486088 380 ntBASIC5.43□□□□□ -1.54
CDK3Q00526 RN7SL214P-201ENST00000487317 265 ntBASIC5.43□□□□□ -1.54
CDK3Q00526 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK3Q00526 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK3Q00526 OR10D4P-201ENST00000525892 951 ntBASIC5.43□□□□□ -1.54
CDK3Q00526 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.43□□□□□ -1.54
CDK3Q00526 AC084824.2-201ENST00000548906 345 ntBASIC5.43□□□□□ -1.54
CDK3Q00526 BLZF2P-201ENST00000553776 1130 ntBASIC5.43□□□□□ -1.54
CDK3Q00526 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK3Q00526 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK3Q00526 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK3Q00526 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDK3Q00526 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.43□□□□□ -1.54
CDK3Q00526 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDK3Q00526 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.43□□□□□ -1.54
CDK3Q00526 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDK3Q00526 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDK3Q00526 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDK3Q00526 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDK3Q00526 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDK3Q00526 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDK3Q00526 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CDK3Q00526 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK3Q00526 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK3Q00526 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CDK3Q00526 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms