Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AL162431.4-201ENST00000604674 411 ntBASIC7.38□□□□□ -1.23
CLTCL1P53675 AP000346.3-201ENST00000622821 210 ntBASIC7.38□□□□□ -1.23
CLTCL1P53675 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.38□□□□□ -1.23
CLTCL1P53675 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC7.38□□□□□ -1.23
CLTCL1P53675 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC7.38□□□□□ -1.23
CLTCL1P53675 AC135068.12-201ENST00000637370 931 ntBASIC7.38□□□□□ -1.23
CLTCL1P53675 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC7.38□□□□□ -1.23
CLTCL1P53675 OR9K1P-202ENST00000641111 3217 ntBASIC7.38□□□□□ -1.23
CLTCL1P53675 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CLTCL1P53675 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.38□□□□□ -1.23
CLTCL1P53675 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CLTCL1P53675 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CLTCL1P53675 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CLTCL1P53675 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
CLTCL1P53675 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CLTCL1P53675 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CLTCL1P53675 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CLTCL1P53675 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CLTCL1P53675 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CLTCL1P53675 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CLTCL1P53675 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC7.38□□□□□ -1.23
CLTCL1P53675 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CLTCL1P53675 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
CLTCL1P53675 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CLTCL1P53675 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
CLTCL1P53675 MIR192-201ENST00000384915 110 ntBASIC7.38□□□□□ -1.23
CLTCL1P53675 HMGB3P7-201ENST00000400214 611 ntBASIC7.38□□□□□ -1.23
CLTCL1P53675 AC004074.1-201ENST00000421810 1063 ntBASIC7.38□□□□□ -1.23
CLTCL1P53675 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CLTCL1P53675 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC7.38□□□□□ -1.23
CLTCL1P53675 AC090804.1-201ENST00000448870 490 ntBASIC7.38□□□□□ -1.23
CLTCL1P53675 GYG1P1-201ENST00000460864 698 ntBASIC7.38□□□□□ -1.23
CLTCL1P53675 RPL5P22-201ENST00000480199 884 ntBASIC7.38□□□□□ -1.23
CLTCL1P53675 AC079064.1-201ENST00000528365 362 ntBASIC7.38□□□□□ -1.23
CLTCL1P53675 EDDM3DP-201ENST00000554692 434 ntBASIC7.38□□□□□ -1.23
CLTCL1P53675 MIR4270-201ENST00000581799 70 ntBASIC7.38□□□□□ -1.23
CLTCL1P53675 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.38□□□□□ -1.23
CLTCL1P53675 AC011453.2-201ENST00000603737 729 ntBASIC7.38□□□□□ -1.23
CLTCL1P53675 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CLTCL1P53675 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CLTCL1P53675 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CLTCL1P53675 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC7.37□□□□□ -1.23
CLTCL1P53675 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CLTCL1P53675 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.37□□□□□ -1.23
CLTCL1P53675 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CLTCL1P53675 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC7.37□□□□□ -1.23
CLTCL1P53675 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CLTCL1P53675 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.37□□□□□ -1.23
CLTCL1P53675 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC7.37□□□□□ -1.23
CLTCL1P53675 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.37□□□□□ -1.23
CLTCL1P53675 AC007159.1-201ENST00000566529 4706 ntBASIC7.37□□□□□ -1.23
CLTCL1P53675 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CLTCL1P53675 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC7.37□□□□□ -1.23
CLTCL1P53675 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC7.37□□□□□ -1.23
CLTCL1P53675 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CLTCL1P53675 AL138878.2-201ENST00000440581 1241 ntBASIC7.37□□□□□ -1.23
CLTCL1P53675 RPL7AP61-201ENST00000443410 636 ntBASIC7.37□□□□□ -1.23
CLTCL1P53675 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC7.37□□□□□ -1.23
CLTCL1P53675 RPL21P133-201ENST00000443666 476 ntBASIC7.37□□□□□ -1.23
CLTCL1P53675 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC7.37□□□□□ -1.23
CLTCL1P53675 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CLTCL1P53675 RPS12P31-201ENST00000491419 398 ntBASIC7.37□□□□□ -1.23
CLTCL1P53675 GAPDHP56-201ENST00000506031 988 ntBASIC7.37□□□□□ -1.23
CLTCL1P53675 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC7.37□□□□□ -1.23
CLTCL1P53675 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC7.37□□□□□ -1.23
CLTCL1P53675 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC7.36□□□□□ -1.23
CLTCL1P53675 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
CLTCL1P53675 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CLTCL1P53675 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CLTCL1P53675 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CLTCL1P53675 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
CLTCL1P53675 LARS-201ENST00000274562 2213 ntTSL 2 BASIC7.36□□□□□ -1.23
CLTCL1P53675 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CLTCL1P53675 AC126755.2-208ENST00000327792 462 ntBASIC7.36□□□□□ -1.23
CLTCL1P53675 AC138969.1-213ENST00000331436 462 ntBASIC7.36□□□□□ -1.23
CLTCL1P53675 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC7.36□□□□□ -1.23
CLTCL1P53675 OR8V1P-201ENST00000395193 873 ntBASIC7.36□□□□□ -1.23
CLTCL1P53675 GTF2IP5-201ENST00000414608 731 ntBASIC7.36□□□□□ -1.23
CLTCL1P53675 BX276092.6-201ENST00000430476 250 ntBASIC7.36□□□□□ -1.23
CLTCL1P53675 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC7.36□□□□□ -1.23
CLTCL1P53675 TCEA1P1-201ENST00000449716 880 ntBASIC7.36□□□□□ -1.23
CLTCL1P53675 BX276092.8-201ENST00000455722 250 ntBASIC7.36□□□□□ -1.23
CLTCL1P53675 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC7.36□□□□□ -1.23
CLTCL1P53675 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC7.36□□□□□ -1.23
CLTCL1P53675 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC7.36□□□□□ -1.23
CLTCL1P53675 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
CLTCL1P53675 AC000095.2-202ENST00000637415 154 ntBASIC7.36□□□□□ -1.23
CLTCL1P53675 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC7.36□□□□□ -1.23
CLTCL1P53675 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CLTCL1P53675 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
CLTCL1P53675 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CLTCL1P53675 AC026951.1-201ENST00000559530 2459 ntBASIC7.36□□□□□ -1.23
CLTCL1P53675 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
CLTCL1P53675 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC7.36□□□□□ -1.23
CLTCL1P53675 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.36□□□□□ -1.23
CLTCL1P53675 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC7.35□□□□□ -1.23
CLTCL1P53675 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.35□□□□□ -1.23
CLTCL1P53675 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.35□□□□□ -1.23
CLTCL1P53675 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CLTCL1P53675 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms