Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC092865.3-201ENST00000425390 1026 ntBASIC6.92□□□□□ -1.3
MRE11P49959 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.92□□□□□ -1.3
MRE11P49959 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC6.92□□□□□ -1.3
MRE11P49959 RPSAP65-201ENST00000429660 595 ntBASIC6.92□□□□□ -1.3
MRE11P49959 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.92□□□□□ -1.3
MRE11P49959 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.92□□□□□ -1.3
MRE11P49959 RPL23AP60-201ENST00000450011 454 ntBASIC6.92□□□□□ -1.3
MRE11P49959 OR52I1-201ENST00000450052 1050 ntBASIC6.92□□□□□ -1.3
MRE11P49959 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.92□□□□□ -1.3
MRE11P49959 HLA-DPA3-207ENST00000454398 229 ntBASIC6.92□□□□□ -1.3
MRE11P49959 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.92□□□□□ -1.3
MRE11P49959 AC104164.3-201ENST00000467363 1258 ntBASIC6.92□□□□□ -1.3
MRE11P49959 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.92□□□□□ -1.3
MRE11P49959 AC010627.1-201ENST00000503819 1294 ntBASIC6.92□□□□□ -1.3
MRE11P49959 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
MRE11P49959 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.92□□□□□ -1.3
MRE11P49959 AC078899.1-201ENST00000521432 1185 ntBASIC6.92□□□□□ -1.3
MRE11P49959 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.92□□□□□ -1.3
MRE11P49959 SOX5P1-201ENST00000524155 1127 ntBASIC6.92□□□□□ -1.3
MRE11P49959 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.92□□□□□ -1.3
MRE11P49959 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC6.92□□□□□ -1.3
MRE11P49959 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.92□□□□□ -1.3
MRE11P49959 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC6.92□□□□□ -1.3
MRE11P49959 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.92□□□□□ -1.3
MRE11P49959 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.92□□□□□ -1.3
MRE11P49959 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.92□□□□□ -1.3
MRE11P49959 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.92□□□□□ -1.3
MRE11P49959 BNIP3P24-201ENST00000593398 557 ntBASIC6.92□□□□□ -1.3
MRE11P49959 AP000864.1-201ENST00000609424 650 ntBASIC6.92□□□□□ -1.3
MRE11P49959 AC116651.1-201ENST00000609724 556 ntBASIC6.92□□□□□ -1.3
MRE11P49959 AC068880.4-201ENST00000623082 495 ntBASIC6.92□□□□□ -1.3
MRE11P49959 AP003476.1-201ENST00000623984 516 ntBASIC6.92□□□□□ -1.3
MRE11P49959 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.92□□□□□ -1.3
MRE11P49959 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.92□□□□□ -1.3
MRE11P49959 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
MRE11P49959 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
MRE11P49959 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
MRE11P49959 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
MRE11P49959 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
MRE11P49959 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.92□□□□□ -1.3
MRE11P49959 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.92□□□□□ -1.3
MRE11P49959 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
MRE11P49959 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
MRE11P49959 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.92□□□□□ -1.3
MRE11P49959 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
MRE11P49959 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
MRE11P49959 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
MRE11P49959 AC092376.2-201ENST00000622621 4116 ntBASIC6.91□□□□□ -1.3
MRE11P49959 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
MRE11P49959 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
MRE11P49959 OR9K1P-201ENST00000326513 941 ntBASIC6.91□□□□□ -1.3
MRE11P49959 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
MRE11P49959 RNA5SP140-201ENST00000364524 92 ntBASIC6.91□□□□□ -1.3
MRE11P49959 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
MRE11P49959 RN7SKP279-201ENST00000411383 298 ntBASIC6.91□□□□□ -1.3
MRE11P49959 VN1R51P-201ENST00000411675 945 ntBASIC6.91□□□□□ -1.3
MRE11P49959 AL035422.1-201ENST00000414193 397 ntBASIC6.91□□□□□ -1.3
MRE11P49959 AL365338.1-201ENST00000422282 858 ntBASIC6.91□□□□□ -1.3
MRE11P49959 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.91□□□□□ -1.3
MRE11P49959 AL512661.1-201ENST00000434586 1253 ntBASIC6.91□□□□□ -1.3
MRE11P49959 GAPDHP58-201ENST00000438477 1006 ntBASIC6.91□□□□□ -1.3
MRE11P49959 MTND2P22-201ENST00000444325 1033 ntBASIC6.91□□□□□ -1.3
MRE11P49959 GAPDHP14-201ENST00000450472 937 ntBASIC6.91□□□□□ -1.3
MRE11P49959 AC023141.9-201ENST00000458734 412 ntBASIC6.91□□□□□ -1.3
MRE11P49959 snoU109.3-201ENST00000459477 145 ntBASIC6.91□□□□□ -1.3
MRE11P49959 METTL15P1-201ENST00000481421 1045 ntBASIC6.91□□□□□ -1.3
MRE11P49959 RPL23AP40-201ENST00000487630 390 ntBASIC6.91□□□□□ -1.3
MRE11P49959 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
MRE11P49959 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
MRE11P49959 RPS26P24-201ENST00000497656 331 ntBASIC6.91□□□□□ -1.3
MRE11P49959 AC105313.1-201ENST00000509121 353 ntBASIC6.91□□□□□ -1.3
MRE11P49959 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.91□□□□□ -1.3
MRE11P49959 HMGN1P17-201ENST00000513734 295 ntBASIC6.91□□□□□ -1.3
MRE11P49959 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.91□□□□□ -1.3
MRE11P49959 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.91□□□□□ -1.3
MRE11P49959 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.91□□□□□ -1.3
MRE11P49959 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
MRE11P49959 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.91□□□□□ -1.3
MRE11P49959 AC135279.1-201ENST00000543493 504 ntBASIC6.91□□□□□ -1.3
MRE11P49959 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.91□□□□□ -1.3
MRE11P49959 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.91□□□□□ -1.3
MRE11P49959 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.91□□□□□ -1.3
MRE11P49959 AC025165.5-201ENST00000602802 578 ntBASIC6.91□□□□□ -1.3
MRE11P49959 AL583832.1-201ENST00000603227 784 ntBASIC6.91□□□□□ -1.3
MRE11P49959 AL133481.2-203ENST00000607558 139 ntBASIC6.91□□□□□ -1.3
MRE11P49959 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.91□□□□□ -1.3
MRE11P49959 MIR6085-201ENST00000618314 110 ntBASIC6.91□□□□□ -1.3
MRE11P49959 AL137067.2-201ENST00000621202 131 ntBASIC6.91□□□□□ -1.3
MRE11P49959 LINC00216-201ENST00000623548 1126 ntBASIC6.91□□□□□ -1.3
MRE11P49959 AP000676.4-201ENST00000624659 623 ntBASIC6.91□□□□□ -1.3
MRE11P49959 AC129915.3-201ENST00000634128 948 ntBASIC6.91□□□□□ -1.3
MRE11P49959 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.91□□□□□ -1.3
MRE11P49959 OR7A1P-202ENST00000641542 1158 ntBASIC6.91□□□□□ -1.3
MRE11P49959 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
MRE11P49959 AC125336.1-201ENST00000508893 2827 ntBASIC6.91□□□□□ -1.3
MRE11P49959 RBPJP7-201ENST00000442803 1447 ntBASIC6.91□□□□□ -1.3
MRE11P49959 RBPJP5-201ENST00000449433 1447 ntBASIC6.91□□□□□ -1.3
MRE11P49959 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
MRE11P49959 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.91□□□□□ -1.3
MRE11P49959 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms