Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
NEDD4P46934 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.42
NEDD4P46934 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NEDD4P46934 U3.7-201ENST00000363668 216 ntBASIC6.21□□□□□ -1.42
NEDD4P46934 AC005522.1-201ENST00000395416 346 ntBASIC6.21□□□□□ -1.42
NEDD4P46934 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.21□□□□□ -1.42
NEDD4P46934 TRGV5P-201ENST00000419915 354 ntBASIC6.21□□□□□ -1.42
NEDD4P46934 AC093655.2-201ENST00000425735 631 ntBASIC6.21□□□□□ -1.42
NEDD4P46934 RPL7AP49-201ENST00000429522 581 ntBASIC6.21□□□□□ -1.42
NEDD4P46934 AL591438.1-201ENST00000433508 581 ntBASIC6.21□□□□□ -1.42
NEDD4P46934 CLUHP1-201ENST00000435012 1190 ntBASIC6.21□□□□□ -1.42
NEDD4P46934 RPS4XP20-201ENST00000505751 772 ntBASIC6.21□□□□□ -1.42
NEDD4P46934 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.21□□□□□ -1.42
NEDD4P46934 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.21□□□□□ -1.42
NEDD4P46934 AC134349.2-201ENST00000535136 910 ntBASIC6.21□□□□□ -1.42
NEDD4P46934 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.21□□□□□ -1.42
NEDD4P46934 AC105036.1-201ENST00000566222 271 ntBASIC6.21□□□□□ -1.42
NEDD4P46934 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.21□□□□□ -1.42
NEDD4P46934 AL049840.6-202ENST00000603373 279 ntBASIC6.21□□□□□ -1.42
NEDD4P46934 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NEDD4P46934 AC133552.1-201ENST00000569988 4007 ntBASIC6.21□□□□□ -1.42
NEDD4P46934 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NEDD4P46934 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
NEDD4P46934 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.21□□□□□ -1.42
NEDD4P46934 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.2□□□□□ -1.42
NEDD4P46934 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD4P46934 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NEDD4P46934 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.2□□□□□ -1.42
NEDD4P46934 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD4P46934 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD4P46934 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD4P46934 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.2□□□□□ -1.42
NEDD4P46934 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD4P46934 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
NEDD4P46934 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.2□□□□□ -1.42
NEDD4P46934 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD4P46934 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.2□□□□□ -1.42
NEDD4P46934 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD4P46934 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NEDD4P46934 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD4P46934 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
NEDD4P46934 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD4P46934 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.2□□□□□ -1.42
NEDD4P46934 Z68694.1-201ENST00000413929 841 ntBASIC6.2□□□□□ -1.42
NEDD4P46934 HSPD1P12-201ENST00000429127 1069 ntBASIC6.2□□□□□ -1.42
NEDD4P46934 RPL19P16-201ENST00000433839 588 ntBASIC6.2□□□□□ -1.42
NEDD4P46934 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.2□□□□□ -1.42
NEDD4P46934 RPS11P7-201ENST00000442125 465 ntBASIC6.2□□□□□ -1.42
NEDD4P46934 REG1CP-206ENST00000447469 496 ntBASIC6.2□□□□□ -1.42
NEDD4P46934 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.2□□□□□ -1.42
NEDD4P46934 AC074386.1-201ENST00000476560 767 ntBASIC6.2□□□□□ -1.42
NEDD4P46934 RN7SL30P-201ENST00000488416 306 ntBASIC6.2□□□□□ -1.42
NEDD4P46934 AC006499.3-201ENST00000506077 748 ntBASIC6.2□□□□□ -1.42
NEDD4P46934 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.2□□□□□ -1.42
NEDD4P46934 AC027369.5-201ENST00000533838 755 ntBASIC6.2□□□□□ -1.42
NEDD4P46934 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD4P46934 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD4P46934 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD4P46934 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD4P46934 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.2□□□□□ -1.42
NEDD4P46934 AC040958.1-201ENST00000561102 201 ntBASIC6.2□□□□□ -1.42
NEDD4P46934 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.2□□□□□ -1.42
NEDD4P46934 MIR4660-201ENST00000583549 74 ntBASIC6.2□□□□□ -1.42
NEDD4P46934 OR7E18P-201ENST00000592589 702 ntBASIC6.2□□□□□ -1.42
NEDD4P46934 AC026367.3-201ENST00000619032 590 ntBASIC6.2□□□□□ -1.42
NEDD4P46934 MIR6839-201ENST00000620425 113 ntBASIC6.2□□□□□ -1.42
NEDD4P46934 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD4P46934 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD4P46934 AC109780.1-201ENST00000451768 1344 ntBASIC6.19□□□□□ -1.42
NEDD4P46934 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
NEDD4P46934 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD4P46934 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
NEDD4P46934 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
NEDD4P46934 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.19□□□□□ -1.42
NEDD4P46934 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD4P46934 MTND5P12-201ENST00000502851 1449 ntBASIC6.19□□□□□ -1.42
NEDD4P46934 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.19□□□□□ -1.42
NEDD4P46934 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD4P46934 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD4P46934 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.19□□□□□ -1.42
NEDD4P46934 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD4P46934 RNA5SP241-201ENST00000391326 114 ntBASIC6.19□□□□□ -1.42
NEDD4P46934 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.19□□□□□ -1.42
NEDD4P46934 RN7SKP278-201ENST00000410504 342 ntBASIC6.19□□□□□ -1.42
NEDD4P46934 AC090018.1-201ENST00000434369 367 ntBASIC6.19□□□□□ -1.42
NEDD4P46934 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.19□□□□□ -1.42
NEDD4P46934 AC009127.1-201ENST00000467090 155 ntBASIC6.19□□□□□ -1.42
NEDD4P46934 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.19□□□□□ -1.42
NEDD4P46934 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.19□□□□□ -1.42
NEDD4P46934 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD4P46934 MTCYBP13-201ENST00000578634 1093 ntBASIC6.19□□□□□ -1.42
NEDD4P46934 RN7SL708P-201ENST00000580952 299 ntBASIC6.19□□□□□ -1.42
NEDD4P46934 AC009950.2-201ENST00000636548 183 ntBASIC6.19□□□□□ -1.42
NEDD4P46934 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.19□□□□□ -1.42
NEDD4P46934 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.19□□□□□ -1.42
NEDD4P46934 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD4P46934 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.18□□□□□ -1.42
NEDD4P46934 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NEDD4P46934 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.18□□□□□ -1.42
NEDD4P46934 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms