Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AP004607.2-201ENST00000533949 322 ntBASIC5.46□□□□□ -1.54
FDFT1P37268 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.46□□□□□ -1.54
FDFT1P37268 AC106730.2-201ENST00000566641 540 ntBASIC5.46□□□□□ -1.54
FDFT1P37268 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.46□□□□□ -1.54
FDFT1P37268 MIR6839-201ENST00000620425 113 ntBASIC5.46□□□□□ -1.54
FDFT1P37268 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.46□□□□□ -1.54
FDFT1P37268 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
FDFT1P37268 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
FDFT1P37268 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
FDFT1P37268 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
FDFT1P37268 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
FDFT1P37268 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.46□□□□□ -1.54
FDFT1P37268 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
FDFT1P37268 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
FDFT1P37268 MRRFP1-201ENST00000435941 1675 ntBASIC5.46□□□□□ -1.54
FDFT1P37268 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.46□□□□□ -1.54
FDFT1P37268 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
FDFT1P37268 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
FDFT1P37268 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
FDFT1P37268 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
FDFT1P37268 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.46□□□□□ -1.54
FDFT1P37268 MTCO1P46-201ENST00000451639 1491 ntBASIC5.45□□□□□ -1.54
FDFT1P37268 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.45□□□□□ -1.54
FDFT1P37268 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.45□□□□□ -1.54
FDFT1P37268 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FDFT1P37268 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
FDFT1P37268 ADAM5-202ENST00000399789 1942 ntBASIC5.45□□□□□ -1.54
FDFT1P37268 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
FDFT1P37268 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.45□□□□□ -1.54
FDFT1P37268 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.45□□□□□ -1.54
FDFT1P37268 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
FDFT1P37268 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FDFT1P37268 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.45□□□□□ -1.54
FDFT1P37268 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.45□□□□□ -1.54
FDFT1P37268 AC007068.1-201ENST00000396690 844 ntBASIC5.45□□□□□ -1.54
FDFT1P37268 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
FDFT1P37268 COX5BP7-201ENST00000414780 274 ntBASIC5.45□□□□□ -1.54
FDFT1P37268 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.45□□□□□ -1.54
FDFT1P37268 PRUNEP1-201ENST00000425846 705 ntBASIC5.45□□□□□ -1.54
FDFT1P37268 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.45□□□□□ -1.54
FDFT1P37268 RPL23AP19-201ENST00000436229 369 ntBASIC5.45□□□□□ -1.54
FDFT1P37268 AC064862.4-201ENST00000442180 334 ntBASIC5.45□□□□□ -1.54
FDFT1P37268 AC104849.1-201ENST00000462623 405 ntBASIC5.45□□□□□ -1.54
FDFT1P37268 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FDFT1P37268 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.45□□□□□ -1.54
FDFT1P37268 AC023424.1-201ENST00000496058 459 ntBASIC5.45□□□□□ -1.54
FDFT1P37268 AC074087.1-201ENST00000512059 724 ntBASIC5.45□□□□□ -1.54
FDFT1P37268 FTH1P11-201ENST00000517577 551 ntBASIC5.45□□□□□ -1.54
FDFT1P37268 TMEM97P2-201ENST00000517841 403 ntBASIC5.45□□□□□ -1.54
FDFT1P37268 AC022826.1-201ENST00000519383 805 ntBASIC5.45□□□□□ -1.54
FDFT1P37268 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.45□□□□□ -1.54
FDFT1P37268 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.45□□□□□ -1.54
FDFT1P37268 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FDFT1P37268 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.45□□□□□ -1.54
FDFT1P37268 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.45□□□□□ -1.54
FDFT1P37268 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.45□□□□□ -1.54
FDFT1P37268 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
FDFT1P37268 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FDFT1P37268 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FDFT1P37268 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.45□□□□□ -1.54
FDFT1P37268 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
FDFT1P37268 AC022417.1-201ENST00000624768 1303 ntBASIC5.45□□□□□ -1.54
FDFT1P37268 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
FDFT1P37268 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FDFT1P37268 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
FDFT1P37268 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.45□□□□□ -1.54
FDFT1P37268 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
FDFT1P37268 MTCO1P7-201ENST00000419523 1542 ntBASIC5.44□□□□□ -1.54
FDFT1P37268 AC005005.4-201ENST00000623789 16698 ntBASIC5.44□□□□□ -1.54
FDFT1P37268 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
FDFT1P37268 THAP12P5-201ENST00000405864 2275 ntBASIC5.44□□□□□ -1.54
FDFT1P37268 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.44□□□□□ -1.54
FDFT1P37268 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
FDFT1P37268 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.44□□□□□ -1.54
FDFT1P37268 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.44□□□□□ -1.54
FDFT1P37268 PCNPP4-201ENST00000414817 517 ntBASIC5.44□□□□□ -1.54
FDFT1P37268 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.44□□□□□ -1.54
FDFT1P37268 IPPKP1-201ENST00000422501 768 ntBASIC5.44□□□□□ -1.54
FDFT1P37268 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.44□□□□□ -1.54
FDFT1P37268 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.44□□□□□ -1.54
FDFT1P37268 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.44□□□□□ -1.54
FDFT1P37268 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.44□□□□□ -1.54
FDFT1P37268 PRPF38AP1-201ENST00000451976 933 ntBASIC5.44□□□□□ -1.54
FDFT1P37268 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.44□□□□□ -1.54
FDFT1P37268 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.44□□□□□ -1.54
FDFT1P37268 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.44□□□□□ -1.54
FDFT1P37268 RPL7P41-201ENST00000485823 957 ntBASIC5.44□□□□□ -1.54
FDFT1P37268 RN7SL423P-201ENST00000486202 304 ntBASIC5.44□□□□□ -1.54
FDFT1P37268 AC069304.1-201ENST00000491593 704 ntBASIC5.44□□□□□ -1.54
FDFT1P37268 KATNBL1P4-201ENST00000503545 918 ntBASIC5.44□□□□□ -1.54
FDFT1P37268 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.44□□□□□ -1.54
FDFT1P37268 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
FDFT1P37268 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.44□□□□□ -1.54
FDFT1P37268 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.44□□□□□ -1.54
FDFT1P37268 AC040958.1-201ENST00000561102 201 ntBASIC5.44□□□□□ -1.54
FDFT1P37268 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.44□□□□□ -1.54
FDFT1P37268 MIR1273E-201ENST00000581165 102 ntBASIC5.44□□□□□ -1.54
FDFT1P37268 PRPF19P1-201ENST00000584766 898 ntBASIC5.44□□□□□ -1.54
FDFT1P37268 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.44□□□□□ -1.54
FDFT1P37268 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms