Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.47□□□□□ -1.53
TRIM23P36406 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM23P36406 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM23P36406 AP005262.1-201ENST00000582646 997 ntBASIC5.47□□□□□ -1.53
TRIM23P36406 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM23P36406 AL356752.1-201ENST00000615844 593 ntBASIC5.47□□□□□ -1.53
TRIM23P36406 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM23P36406 SAMMSON-209ENST00000641222 1100 ntBASIC5.47□□□□□ -1.53
TRIM23P36406 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM23P36406 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM23P36406 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM23P36406 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.47□□□□□ -1.53
TRIM23P36406 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM23P36406 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM23P36406 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM23P36406 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM23P36406 AC093909.5-201ENST00000621839 1799 ntBASIC5.47□□□□□ -1.53
TRIM23P36406 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TRIM23P36406 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM23P36406 AC003985.2-201ENST00000562268 1669 ntBASIC5.47□□□□□ -1.53
TRIM23P36406 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM23P36406 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM23P36406 AC020656.2-201ENST00000613291 5309 ntBASIC5.46□□□□□ -1.53
TRIM23P36406 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM23P36406 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.46□□□□□ -1.53
TRIM23P36406 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM23P36406 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
TRIM23P36406 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TRIM23P36406 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM23P36406 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM23P36406 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM23P36406 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TRIM23P36406 MIR1178-201ENST00000408396 91 ntBASIC5.46□□□□□ -1.54
TRIM23P36406 RNU2-22P-201ENST00000411266 212 ntBASIC5.46□□□□□ -1.54
TRIM23P36406 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM23P36406 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM23P36406 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM23P36406 HMGN2P27-201ENST00000427352 270 ntBASIC5.46□□□□□ -1.54
TRIM23P36406 UBE2V2P1-201ENST00000434717 398 ntBASIC5.46□□□□□ -1.54
TRIM23P36406 OR2AO1P-201ENST00000476497 403 ntBASIC5.46□□□□□ -1.54
TRIM23P36406 RPS17P5-201ENST00000498293 408 ntBASIC5.46□□□□□ -1.54
TRIM23P36406 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM23P36406 AC024558.1-201ENST00000505008 528 ntBASIC5.46□□□□□ -1.54
TRIM23P36406 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM23P36406 RFPL4AP5-201ENST00000514977 504 ntBASIC5.46□□□□□ -1.54
TRIM23P36406 GAPDHP62-201ENST00000515313 990 ntBASIC5.46□□□□□ -1.54
TRIM23P36406 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM23P36406 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM23P36406 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM23P36406 MTND2P17-201ENST00000550281 688 ntBASIC5.46□□□□□ -1.54
TRIM23P36406 BLZF2P-201ENST00000553776 1130 ntBASIC5.46□□□□□ -1.54
TRIM23P36406 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM23P36406 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM23P36406 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM23P36406 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM23P36406 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM23P36406 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM23P36406 AC074140.1-201ENST00000621617 208 ntBASIC5.46□□□□□ -1.54
TRIM23P36406 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
TRIM23P36406 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM23P36406 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM23P36406 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM23P36406 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM23P36406 AC138907.8-201ENST00000623981 2256 ntBASIC5.46□□□□□ -1.54
TRIM23P36406 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
TRIM23P36406 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM23P36406 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TRIM23P36406 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM23P36406 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
TRIM23P36406 BCORP1-203ENST00000513194 5093 ntBASIC5.46□□□□□ -1.54
TRIM23P36406 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM23P36406 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM23P36406 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM23P36406 AC235565.1-201ENST00000456962 1325 ntBASIC5.46□□□□□ -1.54
TRIM23P36406 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM23P36406 AC068870.1-201ENST00000563737 2455 ntBASIC5.46□□□□□ -1.54
TRIM23P36406 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
TRIM23P36406 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM23P36406 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM23P36406 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM23P36406 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM23P36406 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
TRIM23P36406 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM23P36406 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM23P36406 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
TRIM23P36406 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM23P36406 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM23P36406 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TRIM23P36406 AC007068.1-201ENST00000396690 844 ntBASIC5.45□□□□□ -1.54
TRIM23P36406 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM23P36406 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM23P36406 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM23P36406 AL355433.1-201ENST00000422804 300 ntBASIC5.45□□□□□ -1.54
TRIM23P36406 RIMKLBP2-201ENST00000424737 654 ntBASIC5.45□□□□□ -1.54
TRIM23P36406 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM23P36406 AC105399.1-202ENST00000447303 205 ntBASIC5.45□□□□□ -1.54
TRIM23P36406 MTND6P5-201ENST00000448266 512 ntBASIC5.45□□□□□ -1.54
TRIM23P36406 AC026348.1-201ENST00000462549 1053 ntBASIC5.45□□□□□ -1.54
TRIM23P36406 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM23P36406 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms