Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.89□□□□□ -1.47
RFC1P35251 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.89□□□□□ -1.47
RFC1P35251 AC122688.1-201ENST00000541494 223 ntBASIC5.89□□□□□ -1.47
RFC1P35251 AC079600.1-201ENST00000550326 297 ntBASIC5.89□□□□□ -1.47
RFC1P35251 CR383656.14-201ENST00000551951 406 ntBASIC5.89□□□□□ -1.47
RFC1P35251 AP002884.5-201ENST00000595053 1132 ntBASIC5.89□□□□□ -1.47
RFC1P35251 AC100767.2-201ENST00000604840 693 ntBASIC5.89□□□□□ -1.47
RFC1P35251 LSM1P2-201ENST00000604911 322 ntBASIC5.89□□□□□ -1.47
RFC1P35251 AC005618.4-201ENST00000625053 554 ntBASIC5.89□□□□□ -1.47
RFC1P35251 MIR193BHG-214ENST00000641765 509 ntBASIC5.89□□□□□ -1.47
RFC1P35251 AC083899.2-201ENST00000423285 1376 ntBASIC5.89□□□□□ -1.47
RFC1P35251 SAMM50P1-201ENST00000455403 1399 ntBASIC5.89□□□□□ -1.47
RFC1P35251 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
RFC1P35251 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFC1P35251 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFC1P35251 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFC1P35251 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFC1P35251 AC068446.1-201ENST00000556425 1549 ntBASIC5.89□□□□□ -1.47
RFC1P35251 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.89□□□□□ -1.47
RFC1P35251 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFC1P35251 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
RFC1P35251 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.88□□□□□ -1.47
RFC1P35251 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFC1P35251 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFC1P35251 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFC1P35251 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFC1P35251 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFC1P35251 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RFC1P35251 RN7SKP185-201ENST00000362813 326 ntBASIC5.88□□□□□ -1.47
RFC1P35251 RNU6-618P-201ENST00000363518 112 ntBASIC5.88□□□□□ -1.47
RFC1P35251 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RFC1P35251 RMRPP5-201ENST00000411156 267 ntBASIC5.88□□□□□ -1.47
RFC1P35251 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.88□□□□□ -1.47
RFC1P35251 AL354868.1-201ENST00000417077 482 ntBASIC5.88□□□□□ -1.47
RFC1P35251 REREP1Y-201ENST00000422655 198 ntBASIC5.88□□□□□ -1.47
RFC1P35251 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.88□□□□□ -1.47
RFC1P35251 REREP2Y-201ENST00000439103 200 ntBASIC5.88□□□□□ -1.47
RFC1P35251 SCAND3P1-201ENST00000439854 1060 ntBASIC5.88□□□□□ -1.47
RFC1P35251 ARAFP2-201ENST00000440565 559 ntBASIC5.88□□□□□ -1.47
RFC1P35251 AC005297.1-201ENST00000444765 862 ntBASIC5.88□□□□□ -1.47
RFC1P35251 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.88□□□□□ -1.47
RFC1P35251 MTND5P8-201ENST00000449817 1083 ntBASIC5.88□□□□□ -1.47
RFC1P35251 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFC1P35251 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.88□□□□□ -1.47
RFC1P35251 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFC1P35251 NXT1P1-201ENST00000458481 316 ntBASIC5.88□□□□□ -1.47
RFC1P35251 AC084754.1-201ENST00000463466 464 ntBASIC5.88□□□□□ -1.47
RFC1P35251 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.88□□□□□ -1.47
RFC1P35251 ATP5LP5-201ENST00000483050 299 ntBASIC5.88□□□□□ -1.47
RFC1P35251 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFC1P35251 RNU6-760P-201ENST00000516078 97 ntBASIC5.88□□□□□ -1.47
RFC1P35251 SNORA43.3-201ENST00000517240 103 ntBASIC5.88□□□□□ -1.47
RFC1P35251 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.88□□□□□ -1.47
RFC1P35251 PMS2P3-207ENST00000529061 717 ntBASIC5.88□□□□□ -1.47
RFC1P35251 AP003049.1-201ENST00000529418 457 ntBASIC5.88□□□□□ -1.47
RFC1P35251 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
RFC1P35251 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.88□□□□□ -1.47
RFC1P35251 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.88□□□□□ -1.47
RFC1P35251 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.88□□□□□ -1.47
RFC1P35251 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.88□□□□□ -1.47
RFC1P35251 AP001496.3-201ENST00000580230 913 ntBASIC5.88□□□□□ -1.47
RFC1P35251 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.88□□□□□ -1.47
RFC1P35251 AL391001.1-201ENST00000602747 715 ntBASIC5.88□□□□□ -1.47
RFC1P35251 AC067838.1-201ENST00000606064 577 ntBASIC5.88□□□□□ -1.47
RFC1P35251 AL390318.1-201ENST00000624564 687 ntBASIC5.88□□□□□ -1.47
RFC1P35251 AC106858.1-201ENST00000637497 429 ntBASIC5.88□□□□□ -1.47
RFC1P35251 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFC1P35251 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.88□□□□□ -1.47
RFC1P35251 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFC1P35251 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFC1P35251 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFC1P35251 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.88□□□□□ -1.47
RFC1P35251 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
RFC1P35251 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.88□□□□□ -1.47
RFC1P35251 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.88□□□□□ -1.47
RFC1P35251 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFC1P35251 AC006206.1-201ENST00000544842 3387 ntBASIC5.87□□□□□ -1.47
RFC1P35251 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.87□□□□□ -1.47
RFC1P35251 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RFC1P35251 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.87□□□□□ -1.47
RFC1P35251 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
RFC1P35251 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.87□□□□□ -1.47
RFC1P35251 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
RFC1P35251 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RFC1P35251 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.87□□□□□ -1.47
RFC1P35251 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.87□□□□□ -1.47
RFC1P35251 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.87□□□□□ -1.47
RFC1P35251 AL009179.1-201ENST00000406085 265 ntBASIC5.87□□□□□ -1.47
RFC1P35251 SNORA11.5-201ENST00000408163 128 ntBASIC5.87□□□□□ -1.47
RFC1P35251 MIR1282-201ENST00000408865 101 ntBASIC5.87□□□□□ -1.47
RFC1P35251 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.87□□□□□ -1.47
RFC1P35251 SEPT7P8-201ENST00000413308 775 ntBASIC5.87□□□□□ -1.47
RFC1P35251 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.87□□□□□ -1.47
RFC1P35251 AC093155.2-201ENST00000420734 937 ntBASIC5.87□□□□□ -1.47
RFC1P35251 RPS3P2-201ENST00000421346 701 ntBASIC5.87□□□□□ -1.47
RFC1P35251 IPPKP1-201ENST00000422501 768 ntBASIC5.87□□□□□ -1.47
RFC1P35251 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFC1P35251 KCTD9P1-201ENST00000430462 1167 ntBASIC5.87□□□□□ -1.47
RFC1P35251 FTLP19-201ENST00000433300 394 ntBASIC5.87□□□□□ -1.47
RFC1P35251 AC138761.5-201ENST00000433967 325 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms