Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.73□□□□□ -1.33
RFC4P35249 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFC4P35249 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.73□□□□□ -1.33
RFC4P35249 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
RFC4P35249 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RFC4P35249 AC092747.4-201ENST00000620519 1861 ntBASIC6.73□□□□□ -1.33
RFC4P35249 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
RFC4P35249 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFC4P35249 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFC4P35249 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RFC4P35249 HSPD1P7-201ENST00000447985 1686 ntBASIC6.72□□□□□ -1.33
RFC4P35249 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFC4P35249 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFC4P35249 RNA5SP251-201ENST00000410614 137 ntBASIC6.72□□□□□ -1.33
RFC4P35249 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFC4P35249 AC073410.1-201ENST00000435125 589 ntBASIC6.72□□□□□ -1.33
RFC4P35249 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.72□□□□□ -1.33
RFC4P35249 IGBP1P3-201ENST00000447449 1000 ntBASIC6.72□□□□□ -1.33
RFC4P35249 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.72□□□□□ -1.33
RFC4P35249 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.72□□□□□ -1.33
RFC4P35249 NDUFA5P9-201ENST00000472609 340 ntBASIC6.72□□□□□ -1.33
RFC4P35249 AC058823.1-201ENST00000485315 474 ntBASIC6.72□□□□□ -1.33
RFC4P35249 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.72□□□□□ -1.33
RFC4P35249 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.72□□□□□ -1.33
RFC4P35249 AC122688.1-201ENST00000541494 223 ntBASIC6.72□□□□□ -1.33
RFC4P35249 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RFC4P35249 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.72□□□□□ -1.33
RFC4P35249 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFC4P35249 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.72□□□□□ -1.33
RFC4P35249 AP000769.2-201ENST00000602344 396 ntBASIC6.72□□□□□ -1.33
RFC4P35249 AL031320.1-201ENST00000604177 357 ntBASIC6.72□□□□□ -1.33
RFC4P35249 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.72□□□□□ -1.33
RFC4P35249 AL356752.1-201ENST00000615844 593 ntBASIC6.72□□□□□ -1.33
RFC4P35249 AP000346.3-201ENST00000622821 210 ntBASIC6.72□□□□□ -1.33
RFC4P35249 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
RFC4P35249 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.72□□□□□ -1.33
RFC4P35249 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.72□□□□□ -1.33
RFC4P35249 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.72□□□□□ -1.33
RFC4P35249 AC132825.1-201ENST00000463573 2247 ntBASIC6.72□□□□□ -1.33
RFC4P35249 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RFC4P35249 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RFC4P35249 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
RFC4P35249 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.71□□□□□ -1.33
RFC4P35249 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RFC4P35249 RN7SKP95-201ENST00000362860 303 ntBASIC6.71□□□□□ -1.34
RFC4P35249 RNU1-32P-201ENST00000363937 159 ntBASIC6.71□□□□□ -1.34
RFC4P35249 NUDT19P3-201ENST00000404698 555 ntBASIC6.71□□□□□ -1.34
RFC4P35249 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.71□□□□□ -1.34
RFC4P35249 CHEK2P3-201ENST00000416118 248 ntBASIC6.71□□□□□ -1.34
RFC4P35249 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.71□□□□□ -1.34
RFC4P35249 DDX39BP1-205ENST00000422507 192 ntBASIC6.71□□□□□ -1.34
RFC4P35249 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.71□□□□□ -1.34
RFC4P35249 MGAT2P2-201ENST00000427194 797 ntBASIC6.71□□□□□ -1.34
RFC4P35249 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.71□□□□□ -1.34
RFC4P35249 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.71□□□□□ -1.34
RFC4P35249 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.71□□□□□ -1.34
RFC4P35249 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.71□□□□□ -1.34
RFC4P35249 SLC25A51P1-201ENST00000468432 871 ntBASIC6.71□□□□□ -1.34
RFC4P35249 HMGN2P25-201ENST00000486956 268 ntBASIC6.71□□□□□ -1.34
RFC4P35249 AC012400.1-201ENST00000518452 381 ntBASIC6.71□□□□□ -1.34
RFC4P35249 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RFC4P35249 AC008147.3-201ENST00000548666 354 ntBASIC6.71□□□□□ -1.34
RFC4P35249 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.71□□□□□ -1.34
RFC4P35249 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.71□□□□□ -1.34
RFC4P35249 OOSP1P2-201ENST00000579644 351 ntBASIC6.71□□□□□ -1.34
RFC4P35249 MIR4270-201ENST00000581799 70 ntBASIC6.71□□□□□ -1.34
RFC4P35249 MIR4691-201ENST00000583764 85 ntBASIC6.71□□□□□ -1.34
RFC4P35249 AL023583.1-201ENST00000607518 1143 ntBASIC6.71□□□□□ -1.34
RFC4P35249 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.71□□□□□ -1.34
RFC4P35249 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RFC4P35249 AC073869.8-201ENST00000641806 335 ntBASIC6.71□□□□□ -1.34
RFC4P35249 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RFC4P35249 AC073869.10-201ENST00000642016 354 ntBASIC6.71□□□□□ -1.34
RFC4P35249 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
RFC4P35249 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RFC4P35249 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RFC4P35249 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RFC4P35249 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.71□□□□□ -1.34
RFC4P35249 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.71□□□□□ -1.34
RFC4P35249 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
RFC4P35249 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RFC4P35249 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.71□□□□□ -1.34
RFC4P35249 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
RFC4P35249 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.71□□□□□ -1.34
RFC4P35249 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.71□□□□□ -1.34
RFC4P35249 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
RFC4P35249 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
RFC4P35249 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.7□□□□□ -1.34
RFC4P35249 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RFC4P35249 AC114774.1-201ENST00000507410 1770 ntBASIC6.7□□□□□ -1.34
RFC4P35249 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.7□□□□□ -1.34
RFC4P35249 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
RFC4P35249 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
RFC4P35249 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
RFC4P35249 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RFC4P35249 RNU1-146P-201ENST00000364015 165 ntBASIC6.7□□□□□ -1.34
RFC4P35249 AL133482.1-201ENST00000415988 498 ntBASIC6.7□□□□□ -1.34
RFC4P35249 COX6CP17-201ENST00000421389 185 ntBASIC6.7□□□□□ -1.34
RFC4P35249 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.7□□□□□ -1.34
RFC4P35249 C4BPAP2-201ENST00000428434 478 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms