Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 GLUD1P3-202ENST00000508551 200 ntBASIC6.22□□□□□ -1.41
CIITAP33076 AC093815.1-201ENST00000508637 280 ntBASIC6.22□□□□□ -1.41
CIITAP33076 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.22□□□□□ -1.41
CIITAP33076 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.22□□□□□ -1.41
CIITAP33076 BLZF2P-201ENST00000553776 1130 ntBASIC6.22□□□□□ -1.41
CIITAP33076 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.22□□□□□ -1.41
CIITAP33076 AC009268.1-201ENST00000561352 1203 ntBASIC6.22□□□□□ -1.41
CIITAP33076 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.22□□□□□ -1.41
CIITAP33076 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CIITAP33076 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.22□□□□□ -1.41
CIITAP33076 AC109309.2-201ENST00000612597 332 ntBASIC6.22□□□□□ -1.41
CIITAP33076 AC000095.2-202ENST00000637415 154 ntBASIC6.22□□□□□ -1.41
CIITAP33076 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CIITAP33076 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CIITAP33076 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.22□□□□□ -1.41
CIITAP33076 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CIITAP33076 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.22□□□□□ -1.41
CIITAP33076 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CIITAP33076 AC138907.8-201ENST00000623981 2256 ntBASIC6.22□□□□□ -1.41
CIITAP33076 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CIITAP33076 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CIITAP33076 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
CIITAP33076 AC239868.2-201ENST00000564237 4527 ntBASIC6.21□□□□□ -1.41
CIITAP33076 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
CIITAP33076 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.21□□□□□ -1.42
CIITAP33076 AP002512.4-202ENST00000641599 4530 ntBASIC6.21□□□□□ -1.42
CIITAP33076 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CIITAP33076 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CIITAP33076 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CIITAP33076 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CIITAP33076 RNA5SP335-201ENST00000363817 110 ntBASIC6.21□□□□□ -1.42
CIITAP33076 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.21□□□□□ -1.42
CIITAP33076 AC009804.1-201ENST00000400949 179 ntBASIC6.21□□□□□ -1.42
CIITAP33076 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.21□□□□□ -1.42
CIITAP33076 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.21□□□□□ -1.42
CIITAP33076 SRSF1P1-201ENST00000424058 520 ntBASIC6.21□□□□□ -1.42
CIITAP33076 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.21□□□□□ -1.42
CIITAP33076 CYCSP12-201ENST00000437729 300 ntBASIC6.21□□□□□ -1.42
CIITAP33076 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.21□□□□□ -1.42
CIITAP33076 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CIITAP33076 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.21□□□□□ -1.42
CIITAP33076 IGBP1P3-201ENST00000447449 1000 ntBASIC6.21□□□□□ -1.42
CIITAP33076 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.21□□□□□ -1.42
CIITAP33076 SIAH1P1-201ENST00000479411 923 ntBASIC6.21□□□□□ -1.42
CIITAP33076 AC105420.1-201ENST00000504389 582 ntBASIC6.21□□□□□ -1.42
CIITAP33076 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.21□□□□□ -1.42
CIITAP33076 HMGB1P44-201ENST00000508597 572 ntBASIC6.21□□□□□ -1.42
CIITAP33076 AC011411.1-201ENST00000509592 876 ntBASIC6.21□□□□□ -1.42
CIITAP33076 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.21□□□□□ -1.42
CIITAP33076 NPM1P52-201ENST00000518264 846 ntBASIC6.21□□□□□ -1.42
CIITAP33076 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.21□□□□□ -1.42
CIITAP33076 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.21□□□□□ -1.42
CIITAP33076 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.21□□□□□ -1.42
CIITAP33076 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.21□□□□□ -1.42
CIITAP33076 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.21□□□□□ -1.42
CIITAP33076 MTND2P17-201ENST00000550281 688 ntBASIC6.21□□□□□ -1.42
CIITAP33076 AC007225.2-201ENST00000562529 256 ntBASIC6.21□□□□□ -1.42
CIITAP33076 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.21□□□□□ -1.42
CIITAP33076 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.21□□□□□ -1.42
CIITAP33076 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.21□□□□□ -1.42
CIITAP33076 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.21□□□□□ -1.42
CIITAP33076 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.21□□□□□ -1.42
CIITAP33076 AC022387.2-201ENST00000604050 448 ntBASIC6.21□□□□□ -1.42
CIITAP33076 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.21□□□□□ -1.42
CIITAP33076 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.21□□□□□ -1.42
CIITAP33076 AC005618.4-201ENST00000625053 554 ntBASIC6.21□□□□□ -1.42
CIITAP33076 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.21□□□□□ -1.42
CIITAP33076 AL590396.2-201ENST00000636511 1041 ntBASIC6.21□□□□□ -1.42
CIITAP33076 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.21□□□□□ -1.42
CIITAP33076 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.42
CIITAP33076 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CIITAP33076 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
CIITAP33076 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
CIITAP33076 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CIITAP33076 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.2□□□□□ -1.42
CIITAP33076 AC004076.2-201ENST00000620532 3323 ntBASIC6.2□□□□□ -1.42
CIITAP33076 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CIITAP33076 AC083899.2-201ENST00000423285 1376 ntBASIC6.2□□□□□ -1.42
CIITAP33076 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CIITAP33076 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.2□□□□□ -1.42
CIITAP33076 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CIITAP33076 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CIITAP33076 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.2□□□□□ -1.42
CIITAP33076 MIR133B-201ENST00000362210 119 ntBASIC6.2□□□□□ -1.42
CIITAP33076 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CIITAP33076 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.2□□□□□ -1.42
CIITAP33076 AL607077.1-201ENST00000401718 499 ntBASIC6.2□□□□□ -1.42
CIITAP33076 RN7SKP229-201ENST00000410465 302 ntBASIC6.2□□□□□ -1.42
CIITAP33076 NPM1P4-201ENST00000414095 812 ntBASIC6.2□□□□□ -1.42
CIITAP33076 ELOCP6-201ENST00000429066 328 ntBASIC6.2□□□□□ -1.42
CIITAP33076 RPL12P17-201ENST00000432393 498 ntBASIC6.2□□□□□ -1.42
CIITAP33076 ZFAND6P1-201ENST00000434138 605 ntBASIC6.2□□□□□ -1.42
CIITAP33076 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.2□□□□□ -1.42
CIITAP33076 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.2□□□□□ -1.42
CIITAP33076 ELOCP12-201ENST00000458706 328 ntBASIC6.2□□□□□ -1.42
CIITAP33076 AL133445.1-201ENST00000467051 452 ntBASIC6.2□□□□□ -1.42
CIITAP33076 RPS26P39-201ENST00000469206 341 ntBASIC6.2□□□□□ -1.42
CIITAP33076 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.2□□□□□ -1.42
CIITAP33076 EIF3LP3-201ENST00000495197 822 ntBASIC6.2□□□□□ -1.42
CIITAP33076 AC090058.1-201ENST00000498788 435 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms