Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 AC027216.1-201ENST00000577726 685 ntBASIC5.32□□□□□ -1.56
HLA-DQB2P05538 MIR3176-201ENST00000582210 90 ntBASIC5.32□□□□□ -1.56
HLA-DQB2P05538 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 AC090527.3-201ENST00000619041 548 ntBASIC5.32□□□□□ -1.56
HLA-DQB2P05538 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 AC011493.1-201ENST00000596753 1632 ntBASIC5.32□□□□□ -1.56
HLA-DQB2P05538 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 AC006210.2-201ENST00000367074 1545 ntBASIC5.32□□□□□ -1.56
HLA-DQB2P05538 NCOA4P2-201ENST00000340589 1813 ntBASIC5.32□□□□□ -1.56
HLA-DQB2P05538 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DQB2P05538 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 RNA5SP90-201ENST00000364801 99 ntBASIC5.31□□□□□ -1.56
HLA-DQB2P05538 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 OR52B5P-201ENST00000435337 951 ntBASIC5.31□□□□□ -1.56
HLA-DQB2P05538 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 OR52E3P-201ENST00000452083 936 ntBASIC5.31□□□□□ -1.56
HLA-DQB2P05538 Z92846.1-201ENST00000456203 268 ntBASIC5.31□□□□□ -1.56
HLA-DQB2P05538 RPS26P39-201ENST00000469206 341 ntBASIC5.31□□□□□ -1.56
HLA-DQB2P05538 SNRPCP3-201ENST00000474888 476 ntBASIC5.31□□□□□ -1.56
HLA-DQB2P05538 OR2AO1P-201ENST00000476497 403 ntBASIC5.31□□□□□ -1.56
HLA-DQB2P05538 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 AC016559.2-201ENST00000510759 359 ntBASIC5.31□□□□□ -1.56
HLA-DQB2P05538 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 PRPF19P1-201ENST00000584766 898 ntBASIC5.31□□□□□ -1.56
HLA-DQB2P05538 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 OR52B5P-202ENST00000641118 1110 ntBASIC5.31□□□□□ -1.56
HLA-DQB2P05538 MTCO1P11-201ENST00000429111 1528 ntBASIC5.31□□□□□ -1.56
HLA-DQB2P05538 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DQB2P05538 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 AC235565.1-201ENST00000456962 1325 ntBASIC5.3□□□□□ -1.56
HLA-DQB2P05538 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 MIR133A2-201ENST00000347538 102 ntBASIC5.3□□□□□ -1.56
HLA-DQB2P05538 RNA5SP223-201ENST00000365174 120 ntBASIC5.3□□□□□ -1.56
HLA-DQB2P05538 RNU1-74P-201ENST00000384108 171 ntBASIC5.3□□□□□ -1.56
HLA-DQB2P05538 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 AL136231.1-201ENST00000429407 730 ntBASIC5.3□□□□□ -1.56
HLA-DQB2P05538 AL161722.2-201ENST00000434731 981 ntBASIC5.3□□□□□ -1.56
HLA-DQB2P05538 AC245047.2-201ENST00000441060 530 ntBASIC5.3□□□□□ -1.56
HLA-DQB2P05538 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 GAPDHP14-201ENST00000450472 937 ntBASIC5.3□□□□□ -1.56
HLA-DQB2P05538 PRPF38AP1-201ENST00000451976 933 ntBASIC5.3□□□□□ -1.56
HLA-DQB2P05538 RPL7P39-201ENST00000481157 744 ntBASIC5.3□□□□□ -1.56
HLA-DQB2P05538 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 AC012400.1-201ENST00000518452 381 ntBASIC5.3□□□□□ -1.56
HLA-DQB2P05538 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 AC007225.2-201ENST00000562529 256 ntBASIC5.3□□□□□ -1.56
HLA-DQB2P05538 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 AC022884.2-201ENST00000578535 580 ntBASIC5.3□□□□□ -1.56
HLA-DQB2P05538 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DQB2P05538 AC118658.2-201ENST00000618697 459 ntBASIC5.3□□□□□ -1.56
HLA-DQB2P05538 MIR6886-201ENST00000619864 61 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms