Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AC244517.3-201ENST00000616254 1235 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AP000648.2-201ENST00000624182 404 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AC135068.5-201ENST00000624197 983 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 TMSB4XP4-201ENST00000323496 618 ntBASIC4.79□□□□□ -1.64
HLA-DPB1P04440 RNA5SP131-201ENST00000365452 119 ntBASIC4.79□□□□□ -1.64
HLA-DPB1P04440 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 AC093155.2-201ENST00000420734 937 ntBASIC4.79□□□□□ -1.64
HLA-DPB1P04440 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 RPL34P3-201ENST00000421454 338 ntBASIC4.79□□□□□ -1.64
HLA-DPB1P04440 RPL12P18-201ENST00000437175 325 ntBASIC4.79□□□□□ -1.64
HLA-DPB1P04440 AC064862.4-201ENST00000442180 334 ntBASIC4.79□□□□□ -1.64
HLA-DPB1P04440 RPL31P15-201ENST00000449770 338 ntBASIC4.79□□□□□ -1.64
HLA-DPB1P04440 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 RPS3AP15-201ENST00000483874 781 ntBASIC4.79□□□□□ -1.64
HLA-DPB1P04440 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 AC068993.1-201ENST00000546724 589 ntBASIC4.79□□□□□ -1.64
HLA-DPB1P04440 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 IGBP1P1-201ENST00000554337 1009 ntBASIC4.79□□□□□ -1.64
HLA-DPB1P04440 AC135626.1-201ENST00000556983 435 ntBASIC4.79□□□□□ -1.64
HLA-DPB1P04440 AC022884.2-201ENST00000578535 580 ntBASIC4.79□□□□□ -1.64
HLA-DPB1P04440 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.79□□□□□ -1.64
HLA-DPB1P04440 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 AC063952.1-203ENST00000634410 658 ntBASIC4.79□□□□□ -1.64
HLA-DPB1P04440 AC099654.6-201ENST00000636487 512 ntBASIC4.79□□□□□ -1.64
HLA-DPB1P04440 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 AP005432.1-201ENST00000580891 3485 ntBASIC4.79□□□□□ -1.64
HLA-DPB1P04440 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 YES1P1-201ENST00000418510 1628 ntBASIC4.79□□□□□ -1.64
HLA-DPB1P04440 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DPB1P04440 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 RN7SKP74-201ENST00000362849 309 ntBASIC4.78□□□□□ -1.64
HLA-DPB1P04440 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 RPL10P10-201ENST00000403509 664 ntBASIC4.78□□□□□ -1.64
HLA-DPB1P04440 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.78□□□□□ -1.64
HLA-DPB1P04440 AC046176.1-201ENST00000435260 1170 ntBASIC4.78□□□□□ -1.64
HLA-DPB1P04440 Z84478.1-201ENST00000438230 1219 ntBASIC4.78□□□□□ -1.64
HLA-DPB1P04440 HMGN1P36-201ENST00000446623 298 ntBASIC4.78□□□□□ -1.64
HLA-DPB1P04440 YWHAEP1-201ENST00000453697 763 ntBASIC4.78□□□□□ -1.64
HLA-DPB1P04440 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 RPL15P21-201ENST00000495592 567 ntBASIC4.78□□□□□ -1.64
HLA-DPB1P04440 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.78□□□□□ -1.64
HLA-DPB1P04440 OR8G3P-201ENST00000533406 921 ntBASIC4.78□□□□□ -1.64
HLA-DPB1P04440 BNIP3P1-201ENST00000547295 580 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms