Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.91□□□□□ -1.3
PDGFAP04085 RN7SL426P-201ENST00000579106 295 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.91□□□□□ -1.3
PDGFAP04085 AC233280.2-201ENST00000603917 1070 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 CUX2P1-201ENST00000606426 298 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.91□□□□□ -1.3
PDGFAP04085 AC103710.1-201ENST00000610003 901 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 pRNA.12-201ENST00000614353 90 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 AL391903.2-201ENST00000614532 247 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 pRNA.3-201ENST00000615048 90 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 AC108479.2-201ENST00000617314 601 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 AC018926.3-201ENST00000618841 406 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 uc_338.37-201ENST00000620113 186 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 MTND4P23-201ENST00000447723 1363 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 AL354685.2-201ENST00000448218 1447 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 MROH3P-201ENST00000435735 2676 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.91□□□□□ -1.3
PDGFAP04085 AC022507.1-201ENST00000548349 1505 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PDGFAP04085 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.9□□□□□ -1.3
PDGFAP04085 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC6.9□□□□□ -1.3
PDGFAP04085 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PDGFAP04085 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.9□□□□□ -1.3
PDGFAP04085 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC6.9□□□□□ -1.3
PDGFAP04085 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
PDGFAP04085 OR2A3P-202ENST00000641249 1776 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.9□□□□□ -1.3
PDGFAP04085 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PDGFAP04085 MAPK10-323ENST00000641493 3207 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.9□□□□□ -1.3
PDGFAP04085 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PDGFAP04085 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
PDGFAP04085 AC107021.2-201ENST00000567714 2095 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PDGFAP04085 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PDGFAP04085 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PDGFAP04085 Y_RNA.25-201ENST00000362528 102 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 Y_RNA.61-201ENST00000362835 102 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
PDGFAP04085 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
PDGFAP04085 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
PDGFAP04085 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC6.9□□□□□ -1.3
PDGFAP04085 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
PDGFAP04085 AL589647.1-201ENST00000402485 466 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 AL590002.1-201ENST00000406554 418 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 AL596448.1-201ENST00000415024 392 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 OR51A5P-201ENST00000415429 942 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 BMS1P19-201ENST00000433925 393 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
PDGFAP04085 HMGB3P10-201ENST00000434734 572 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.9□□□□□ -1.3
PDGFAP04085 RPS7P5-201ENST00000441482 581 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC6.9□□□□□ -1.3
PDGFAP04085 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.9□□□□□ -1.3
PDGFAP04085 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC6.9□□□□□ -1.3
PDGFAP04085 GDI2P2-201ENST00000445131 608 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 RPL7P59-201ENST00000447700 943 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PDGFAP04085 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.9□□□□□ -1.3
PDGFAP04085 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.9□□□□□ -1.3
PDGFAP04085 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC6.9□□□□□ -1.3
PDGFAP04085 AC005165.2-201ENST00000466070 380 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.9□□□□□ -1.3
PDGFAP04085 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.9□□□□□ -1.3
PDGFAP04085 MRPL57P6-201ENST00000506570 309 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC6.9□□□□□ -1.3
PDGFAP04085 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.9□□□□□ -1.3
PDGFAP04085 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.9□□□□□ -1.3
PDGFAP04085 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.9□□□□□ -1.3
PDGFAP04085 NDUFA3P2-201ENST00000531434 232 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.9□□□□□ -1.3
PDGFAP04085 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PDGFAP04085 TRAV15-201ENST00000556680 249 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.9□□□□□ -1.3
PDGFAP04085 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC6.9□□□□□ -1.3
PDGFAP04085 RN7SL32P-201ENST00000580514 281 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC6.9□□□□□ -1.3
PDGFAP04085 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.9□□□□□ -1.3
PDGFAP04085 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.9□□□□□ -1.3
PDGFAP04085 BNIP3P8-201ENST00000597863 560 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 U47924.1-201ENST00000606539 434 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 AC245407.2-201ENST00000614199 451 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 AL356274.1-201ENST00000617064 410 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PDGFAP04085 RN7SL680P-201ENST00000620379 299 ntBASIC6.9□□□□□ -1.3
PDGFAP04085 AC012150.2-201ENST00000621300 544 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms