Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AP000648.2-201ENST00000624182 404 ntBASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 MIR1910-201ENST00000636955 80 ntBASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 AL078595.2-201ENST00000605309 1780 ntBASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 RN7SKP240-201ENST00000410583 375 ntBASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 OR6E1P-201ENST00000414424 923 ntBASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 AL596448.1-201ENST00000415024 392 ntBASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 Z93019.1-201ENST00000416450 973 ntBASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 AL121878.1-201ENST00000418638 859 ntBASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 CLUHP1-201ENST00000435012 1190 ntBASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 AL157385.1-201ENST00000446973 268 ntBASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 AC104634.1-201ENST00000452720 462 ntBASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 AC060766.1-201ENST00000590824 627 ntBASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 OR51C1P-201ENST00000608504 942 ntBASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 MIR6778-201ENST00000617912 73 ntBASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 SMG1P4-204ENST00000523028 4131 ntBASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 AL603750.1-201ENST00000624216 1717 ntBASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.25□□□□□ -1.57
TRIM49D1C9J1S8 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 RNA5SP46-201ENST00000362370 120 ntBASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 LYPLA1P3-201ENST00000402650 695 ntBASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 NPM1P38-201ENST00000403835 865 ntBASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 OR2AT2P-201ENST00000413438 905 ntBASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 RPL34P3-201ENST00000421454 338 ntBASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 AC115283.1-201ENST00000427353 400 ntBASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 MTND6P12-201ENST00000428247 522 ntBASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 SUMO2P3-201ENST00000438311 288 ntBASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 KATNBL1P4-201ENST00000503545 918 ntBASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 AC138866.2-201ENST00000508650 584 ntBASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 BX005214.3-202ENST00000619809 325 ntBASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 AC007683.2-201ENST00000624681 714 ntBASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 AP005432.1-201ENST00000580891 3485 ntBASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 MRRFP1-201ENST00000435941 1675 ntBASIC5.24□□□□□ -1.57
TRIM49D1C9J1S8 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 MIR133B-201ENST00000362210 119 ntBASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 SEPT7P2-202ENST00000398921 823 ntBASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 MIR1282-201ENST00000408865 101 ntBASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 GABARAPL3-201ENST00000412799 354 ntBASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 AC007738.1-201ENST00000413892 348 ntBASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 SETP9-201ENST00000423837 832 ntBASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 HMGN1P2-201ENST00000445197 310 ntBASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM49D1C9J1S8 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms