Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 MTND4P21-201ENST00000453886 1357 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AC007618.1-201ENST00000366455 732 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 HMGB1P20-201ENST00000402555 677 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AC245060.4-201ENST00000413293 1121 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AKR1B10P1-201ENST00000425765 942 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 NPM1P26-201ENST00000426339 738 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 ZFAND6P1-201ENST00000434138 605 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AL450023.1-201ENST00000450868 751 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 ACA64.1-201ENST00000459171 127 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 RPL15P21-201ENST00000495592 567 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 EIF3KP3-201ENST00000514461 639 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AC040958.1-201ENST00000561102 201 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AC026826.3-201ENST00000561747 158 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AC092121.1-201ENST00000569452 202 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AL356094.1-201ENST00000624663 1212 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AP001052.1-201ENST00000626421 99 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 AC011755.1-201ENST00000623763 2049 ntBASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRBV4-1A0A0J9YWV2 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
TRBV4-1A0A0J9YWV2 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 AL450345.1-202ENST00000605741 3881 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 OR9K1P-201ENST00000326513 941 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 RNU1-65P-201ENST00000363919 148 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 RNA5SP394-201ENST00000364216 119 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 AC004386.1-201ENST00000393214 761 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 CXADRP1-201ENST00000398098 1095 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 DBIP1-201ENST00000401435 260 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 OR1F12-201ENST00000402365 945 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 AMZ2P2-201ENST00000406819 1057 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 SEPT7P8-201ENST00000413308 775 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 COX5BP7-201ENST00000414780 274 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 RAB28P3-201ENST00000448325 597 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 AL035090.1-201ENST00000454835 332 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 AC245028.2-201ENST00000458673 253 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 AL049874.2-201ENST00000492636 288 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 MYL12BP2-201ENST00000503948 512 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 RNU6-615P-201ENST00000516065 106 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 AC106730.2-201ENST00000566641 540 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 OR51C1P-201ENST00000608504 942 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 CXADRP3-202ENST00000617265 1100 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 AC008691.1-209ENST00000642094 814 ntBASIC4.96□□□□□ -1.62
TRBV4-1A0A0J9YWV2 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms