Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RPL12P31-201ENST00000478433 450 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC018639.1-201ENST00000492994 442 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AL117692.1-201ENST00000494283 713 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 NMNAT1P4-201ENST00000505598 840 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 LINC01411-206ENST00000515513 770 ntTSL 5 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 SNORA33.3-201ENST00000516236 136 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 RNA5SP434-201ENST00000516647 121 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 IGKV2D-38-201ENST00000518423 240 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC011092.1-201ENST00000533128 1047 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 PCED1B-AS1-206ENST00000550426 683 ntTSL 5 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 CDH13-207ENST00000565636 810 ntTSL 5 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC026898.1-201ENST00000586404 571 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC008759.1-201ENST00000589783 983 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AL645949.1-202ENST00000600073 242 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 COX6CP16-201ENST00000603667 216 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AL122127.1-201ENST00000603832 327 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC009027.1-201ENST00000604510 479 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC111188.3-201ENST00000604663 307 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC011626.1-201ENST00000604710 562 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 RN7SKP290-201ENST00000606842 195 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC026333.4-201ENST00000613543 544 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC090607.5-201ENST00000615692 224 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 MRPL57P3-201ENST00000619218 176 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC233309.1-201ENST00000619522 751 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 ARL17A-206ENST00000622488 524 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 TEX41-265ENST00000627785 704 ntTSL 5 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 AC140479.4-205ENST00000636339 820 ntBASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC2.64□□□□□ -1.99
LINC01558Q9Y6Z2 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 AC018555.1-201ENST00000567548 1980 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 OR7A2P-201ENST00000304105 930 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 RNU1-65P-201ENST00000363919 148 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 RNA5SP433-201ENST00000364491 114 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 MIR589-201ENST00000385238 99 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 RNA5SP176-201ENST00000390956 110 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 GLULP6-201ENST00000399502 913 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 MIR921-201ENST00000401133 56 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 AL357515.1-201ENST00000402967 542 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 SNRPEP6-201ENST00000407465 277 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 RNA5SP156-201ENST00000410250 110 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 JKAMPP1-201ENST00000413804 919 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 NIFKP3-201ENST00000417799 865 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 AC074033.1-201ENST00000418623 410 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 SLC35E1P1-201ENST00000419313 864 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 AC006460.1-201ENST00000421437 808 ntTSL 5 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 CHCHD4P2-201ENST00000431135 420 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 TUBB4BP6-201ENST00000437576 479 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 EMC3-AS1-205ENST00000438698 534 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 ATP5LP2-201ENST00000440646 311 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 AL021939.1-201ENST00000441868 886 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 AL445665.1-202ENST00000452436 324 ntBASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC2.63□□□□□ -1.99
LINC01558Q9Y6Z2 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms