Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 RPL7P40-201ENST00000481703 745 ntBASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 HIGD1AP14-201ENST00000507617 282 ntBASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 AL139407.1-201ENST00000613826 1175 ntBASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 RPSAP73-201ENST00000614820 330 ntBASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 WWOX-217ENST00000620008 450 ntTSL 2 BASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 AC011493.1-201ENST00000596753 1632 ntBASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 AC093671.1-201ENST00000624981 2929 ntBASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 SAMM50P1-201ENST00000455403 1399 ntBASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.13□□□□□ -1.27
NPC1L1Q9UHC9 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 RNA5SP90-201ENST00000364801 99 ntBASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 MIR105-1-201ENST00000385222 81 ntBASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 NIPA2P1-201ENST00000426223 976 ntBASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 AL161722.2-201ENST00000434731 981 ntBASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 AC022133.1-201ENST00000490961 571 ntBASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 SNRPCP2-201ENST00000504370 475 ntBASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 AC097173.1-201ENST00000505862 819 ntBASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 ASB8-215ENST00000540782 659 ntTSL 3 BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 NPM1P5-201ENST00000557228 838 ntBASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 AC011447.4-201ENST00000587562 111 ntBASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 CASC19-260ENST00000641828 2001 ntBASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 ERVFRD-3-201ENST00000578561 1617 ntBASIC7.12□□□□□ -1.27
NPC1L1Q9UHC9 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 AC046176.1-201ENST00000435260 1170 ntBASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 KNOP1P3-201ENST00000446933 426 ntBASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 AC108751.3-201ENST00000461814 1020 ntBASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 GTF2F2P1-201ENST00000511083 675 ntBASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 AC092709.1-201ENST00000521355 1045 ntBASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 HAUS8P1-201ENST00000549005 542 ntBASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 SETP3-201ENST00000581726 813 ntBASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 AL137058.3-201ENST00000624531 3099 ntBASIC7.11□□□□□ -1.27
NPC1L1Q9UHC9 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 U8.4-201ENST00000363626 134 ntBASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 MIR223-201ENST00000385204 110 ntBASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 U3.36-201ENST00000408418 213 ntBASIC7.1□□□□□ -1.27
NPC1L1Q9UHC9 AC090018.1-201ENST00000434369 367 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms